RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PNPT1Q8TCS8 783 aaKnown RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 COL26A1Q96A83 441 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 FAM120BQ96EK7 910 aaKnown RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 YIPF2Q9BWQ6 316 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 TRIM4Q9C037 500 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 PCDHAC1Q9H158 963 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 KAT8Q9H7Z6 458 aaKnown RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 FGF17O60258 216 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 SCRG1O75711 98 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 STAMBPO95630 424 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 C1QCP02747 245 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 NTRK1P04629 796 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 CCKBRP32239 447 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 BNIP2Q12982 314 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 FLOT2Q14254 428 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 SPDYE7PQ495Y7 208 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 LRRC25Q8N386 305 aaPredicted RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF583Q96ND8 569 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 ZNF304Q9HCX3 659 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 SIRT3Q9NTG7 399 aaPredicted RBP19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 ACSL6Q9UKU0 697 aa19.21■□□□□ 0.67
VCPKMT-202ENST00000395860 OTOGLQ3ZCN5 2332 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 RNF103-CHMP3A0A140T963 221 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 ENTPD5O75356 428 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 GPR75O95800 540 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 GPX2P18283 190 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 FBLP22087 321 aaKnown RBP19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 PPP2R1BP30154 601 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 XCR1P46094 333 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 ACTR3P61158 418 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 ID2Q02363 134 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 ABHD18Q0P651 414 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 TRAP1Q12931 704 aaKnown RBP19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 IL11RAQ14626 422 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 C1orf189Q5VU69 101 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 RHBDD2Q6NTF9 364 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 ZNF595Q8IYB9 648 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 OR2T12Q8NG77 320 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 PSMA8Q8TAA3 256 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 TBC1D20Q96BZ9 403 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 APMAPQ9HDC9 416 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 SEMA3GQ9NS98 782 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 AKAP7Q9P0M2 348 aaPredicted RBP19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 EGFL7Q9UHF1 273 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 BCAP29Q9UHQ4 241 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 USP22Q9UPT9 525 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 GMEB1Q9Y692 573 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 NUP210LQ5VU65 1888 aa19.2■□□□□ 0.66
VCPKMT-202ENST00000395860 CLDN4O14493 209 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 B4GALT2O60909 372 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 CDC123O75794 336 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 TIAF1O95411 115 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 KRT75O95678 551 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 CPMP14384 443 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PORP16435 677 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 HTR1EP28566 365 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 SOX11P35716 441 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 INSM1Q01101 510 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 SLC13A2Q13183 592 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 ERV3-1Q14264 604 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PWWP2BQ6NUJ5 590 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 OR9A2Q8NGT5 310 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 CLIP3Q96DZ5 547 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 RNF31Q96EP0 1072 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 DPH2Q9BQC3 489 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PRTFDC1Q9NRG1 225 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 MAP4K5Q9Y4K4 846 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PCDHGA1Q9Y5H4 931 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 ACOT8O14734 319 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 POLR1CO15160 346 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 BCAS2O75934 225 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 FHP07954 510 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 HBQ1P09105 142 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 FGF5P12034 268 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PTGER1P34995 402 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 CCT3P49368 545 aaKnown RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 ERFP50548 548 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 OR4D2P58180 307 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 DSG2Q14126 1118 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 TRIP6Q15654 476 aaKnown RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 ARHGAP40Q5TG30 622 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 GPR155Q7Z3F1 870 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PIP4P1Q86T03 277 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 C10orf111Q8N326 155 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 BMPERQ8N8U9 685 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 HIPK4Q8NE63 616 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 TNIP2Q8NFZ5 429 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 ANKRD9Q96BM1 317 aaPredicted RBP19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 CMKLR1Q99788 373 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 CTRCQ99895 268 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 RAD21L1Q9H4I0 556 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 TRPC4Q9UBN4 977 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 PCDHB3Q9Y5E6 796 aa19.19■□□□□ 0.66
VCPKMT-202ENST00000395860 FER1L5A0AVI2 2057 aa19.18■□□□□ 0.66
VCPKMT-202ENST00000395860 FAM220BPB1ANY3 271 aa19.18■□□□□ 0.66
VCPKMT-202ENST00000395860 MGRN1O60291 552 aa19.18■□□□□ 0.66
VCPKMT-202ENST00000395860 RGNQ15493 299 aa19.18■□□□□ 0.66
VCPKMT-202ENST00000395860 CYP51A1Q16850 503 aa19.18■□□□□ 0.66
VCPKMT-202ENST00000395860 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms