RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ARHGAP45Q92619 1136 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 FCGR1BQ92637 280 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 HIST1H2ACQ93077 130 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 MCHR2Q969V1 340 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 RAB7BQ96AH8 199 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ACCSQ96QU6 501 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZNF300Q96RE9 604 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 HOXD1Q9GZZ0 328 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 GDF3Q9NR23 364 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 PPP1R3CQ9UQK1 317 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 PTPRUQ92729 1446 aa4.29□□□□□ -1.72
HMGB1P10-201ENST00000395823 A0A087X002 238 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 A0A1B0GWJ7 208 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 SH2D1BO14796 132 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ARPC1BO15143 372 aaKnown RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 CLDN3O15551 220 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ANXA9O76027 345 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 HPRP00739 348 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 IGHEP01854 428 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 RPLP0P05388 317 aaKnown RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 APRTP07741 180 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 TSPY4P0CV99 314 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 TSPY10P0CW01 314 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 RALAP11233 206 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 MAT2AP31153 395 aaKnown RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 GPR183P32249 361 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ACADSBP45954 432 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ARFIP1P53367 373 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 RAPSNQ13702 412 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 KLF5Q13887 457 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ANKDD1AQ495B1 522 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 RFTN2Q52LD8 501 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 PWWP2BQ6NUJ5 590 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 BHLHB9Q6PI77 547 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZNF730Q6ZMV8 503 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZNF573Q86YE8 665 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 BANPQ8N9N5 519 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 C9orf106Q8NAJ2 232 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 GMCL1P1Q8NEA9 526 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ZNF397Q8NF99 534 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 OR6S1Q8NH40 331 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 GOLGA5Q8TBA6 731 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 PNPLA2Q96AD5 504 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 RBM18Q96H35 190 aaKnown RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 PAIP2Q9BPZ3 127 aaKnown RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 TEX13BQ9BXU2 312 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 NLNQ9BYT8 704 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 TRIM6Q9C030 488 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 SLC25A19Q9HC21 320 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 TMOD2Q9NZR1 351 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 ERVK-18Q9QC07 812 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 MIOXQ9UGB7 285 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 MGAT4BQ9UQ53 548 aa4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 RRP15Q9Y3B9 282 aaKnown RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 KLF2Q9Y5W3 355 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P10-201ENST00000395823 FGD5Q6ZNL6 1462 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 IGHV3-20A0A0C4DH32 117 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM230AA0A1W2PPH8 454 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 RNF222A6NCQ9 220 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 OR5H15A6NDH6 313 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 PDXKO00764 312 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 KIAA0513O60268 411 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 MAGEC1O60732 1142 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CHRNB4P30926 498 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 ADRA1AP35348 466 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 NUMBP49757 651 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 IRX3P78415 501 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 NAAAQ02083 359 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 HSF2Q03933 536 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 OVGP1Q12889 678 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 P2RY14Q15391 338 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 SULT1C3Q6IMI6 304 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 KIAA1161Q6NSJ0 714 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 ERASQ7Z444 233 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CUZD1Q86UP6 607 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CNBD1Q8NA66 436 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CHPT1Q8WUD6 406 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 TMEM37Q8WXS4 190 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 NCLNQ969V3 563 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CNRIP1Q96F85 164 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 VPS39Q96JC1 886 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 F2RL3Q96RI0 385 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CARD6Q9BX69 1037 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 PINK1Q9BXM7 581 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 STARD5Q9NSY2 213 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 ICAM5Q9UMF0 924 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 TCF19Q9Y242 345 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 MFHAS1Q9Y4C4 1052 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 CSNK1G3Q9Y6M4 447 aa4.27□□□□□ -1.73
HMGB1P10-201ENST00000395823 SYNJ2BP-COX16A0A087WUM0 186 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 A0A1B0GUL7 405 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 TMEM110-MUSTN1A8MSY1 372 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 TCP10L2B9ZVM9 353 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 FAM72CH0Y354 149 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 ANGPT2O15123 496 aa4.26□□□□□ -1.73
HMGB1P10-201ENST00000395823 VPS26AO75436 327 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms