RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 PRKD3O94806 890 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 SDHBP21912 280 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 CDH3P22223 829 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 KDELR2P33947 212 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 LSSP48449 732 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 NOVA1P51513 510 aaKnown RBP18.22■□□□□ 0.51
LMNB1-202ENST00000395354 MANFP55145 182 aaKnown RBP18.22■□□□□ 0.51
LMNB1-202ENST00000395354 FOLH1Q04609 750 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 MED21Q13503 144 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 SNAP47Q5SQN1 464 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 ENPP6Q6UWR7 440 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 RNF44Q7L0R7 432 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 TMPRSS9Q7Z410 1059 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 C11orf65Q8NCR3 313 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 OR4D9Q8NGE8 314 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 OR8K5Q8NH50 307 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 PSMA8Q8TAA3 256 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 PYURFQ96I23 114 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 CD180Q99467 661 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 MAP3K3Q99759 626 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 CIB1Q99828 191 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 TMEM38AQ9H6F2 299 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 EPS8L2Q9H6S3 715 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 SYNPO2LQ9H987 977 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 A0A0G2JN53 185 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 CTSVO60911 334 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 TNFRSF21O75509 655 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 C1QCP02747 245 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 NTRK1P04629 796 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 SMIM10L1P0DMW3 83 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 CDK4P11802 303 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 CHI3L1P36222 383 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 SLC30A8Q8IWU4 369 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 GALNT4Q8N4A0 578 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 PNPT1Q8TCS8 783 aaKnown RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 SMIM10Q96HG1 83 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 MACROD1Q9BQ69 325 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 PRDM9Q9NQV7 894 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 C1GALT1Q9NS00 363 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF639Q9UID6 485 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 FAF1Q9UNN5 650 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 V9GYQ6 96 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 MN1Q10571 1320 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 TLCD2A6NGC4 264 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 D6RAR5 112 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 FTH1P19P0C7X4 201 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 PVRP15151 417 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF10P21506 573 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 PLA2G5P39877 138 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 CRATP43155 626 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 ELOAQ14241 798 aaKnown RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 GCNT6Q5T4J0 391 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF655Q8N720 491 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 ZFP28Q8NHY6 868 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 UTP15Q8TED0 518 aaKnown RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 EXOSC8Q96B26 276 aaKnown RBP18.21■□□□□ 0.51
LMNB1-202ENST00000395354 NEURL3Q96EH8 262 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 SEMA6CQ9H3T2 930 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 CXorf36Q9H7Y0 433 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 SLAMF7Q9NQ25 335 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 SLC35C2Q9NQQ7 365 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 GPATCH2Q9NW75 528 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 PDP2Q9P2J9 529 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 DNAJB9Q9UBS3 223 aa18.21■□□□□ 0.51
LMNB1-202ENST00000395354 IGHV5-10-1A0A0J9YXX1 117 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 A0A1W2PR48 441 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 FAM149AA5PLN7 773 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 SLC9B1P1A6NJY1 282 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 A8MU76 341 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 ZSCAN9O15535 394 aaPredicted RBP18.2■□□□□ 0.5
LMNB1-202ENST00000395354 STATHP02808 62 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 SOAT1P35610 550 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 MAGEA8P43361 318 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 RAB8AP61006 207 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 BTN3A2P78410 334 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 INSM1Q01101 510 aaPredicted RBP18.2■□□□□ 0.5
LMNB1-202ENST00000395354 SAXO2Q658L1 398 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 DHRS13Q6UX07 377 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 CBLL1Q75N03 491 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 EIF3MQ7L2H7 374 aaKnown RBP18.2■□□□□ 0.5
LMNB1-202ENST00000395354 FAM86B1Q8N7N1 296 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 KCT2Q8NC54 265 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 RERGQ96A58 199 aaPredicted RBP18.2■□□□□ 0.5
LMNB1-202ENST00000395354 TRAPPC9Q96Q05 1148 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 SERINC2Q96SA4 455 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 SLC29A1Q99808 456 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 DPH2Q9BQC3 489 aaPredicted RBP18.2■□□□□ 0.5
LMNB1-202ENST00000395354 OSBPL11Q9BXB4 747 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 KLHL25Q9H0H3 589 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 BATF3Q9NR55 127 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 UTS2RQ9UKP6 389 aa18.2■□□□□ 0.5
LMNB1-202ENST00000395354 IGHV5-51A0A0C4DH38 117 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 A0A0J9YVX5 310 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 SAC3D1A6NKF1 404 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 ACOX3O15254 700 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 PROM1O43490 865 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 DKK1O94907 266 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 RASAL1O95294 804 aa18.19■□□□□ 0.5
LMNB1-202ENST00000395354 ST6GAL1P15907 406 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms