RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GPR32P1Q8NGA4 272 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 KLHL6Q8WZ60 621 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 TMCO6Q96DC7 493 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC6A18Q96N87 628 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 MTG2Q9H4K7 406 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 NDOR1Q9UHB4 597 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 N6AMT1Q9Y5N5 214 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 RFXAPO00287 272 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 CTSLP07711 333 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 RHOP08100 348 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 ILKQ13418 452 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 SPHARQ15513 63 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF79Q15937 498 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 MEDAGQ5VYS4 303 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 PPP2R2DQ66LE6 453 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 TMEM215Q68D42 235 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 UNC5DQ6UXZ4 953 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 CEACAM20Q6UY09 585 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 HORMAD2Q8N7B1 307 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 FBXO15Q8NCQ5 510 aaPredicted RBP17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 SETD6Q8TBK2 473 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 TMEM80Q96HE8 168 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 TPK1Q9H3S4 243 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 TSPAN11A1L157 253 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 BCHEP06276 602 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 ELAVL4P26378 380 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 RFX2P48378 723 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 TEAD2Q15562 447 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 C6orf183Q5T699 404 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 C12orf73Q69YU5 71 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 HIST2H2AA3Q6FI13 130 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 NXPE4Q6UWF7 544 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 DPPA4Q7L190 304 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 LAX1Q8IWV1 398 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 LRRC56Q8IYG6 542 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 C12orf76Q8N812 135 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 CYB5D2Q8WUJ1 264 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC5A11Q8WWX8 675 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 SORCS1Q8WY21 1168 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 AP2M1Q96CW1 435 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 NLNQ9BYT8 704 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 MARCH7Q9H992 704 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 SNTG1Q9NSN8 517 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 SEC14L4Q9UDX3 406 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 GRIP1Q9Y3R0 1128 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 SNX11Q9Y5W9 270 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 WWP2O00308 870 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 IDH3BO43837 385 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 UGT2B17O75795 530 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 HBQ1P09105 142 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF24P17028 368 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 TGM4P49221 684 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 EPHA5P54756 1037 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 NCF4Q15080 339 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 BAK1Q16611 211 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 VN1R5Q7Z5H4 357 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 BCDIN3DQ7Z5W3 292 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 GRASPQ7Z6J2 395 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 CFAP206Q8IYR0 622 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC38A5Q8WUX1 472 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF707Q96C28 371 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 TMCC3Q9ULS5 477 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 ICKQ9UPZ9 632 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 PCDHGB2Q9Y5G2 931 aa17.43■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF670-ZNF695F2Z2N8 137 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 SEMA3DO95025 777 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 RORCP51449 518 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 PSPHP78330 225 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 TAP2Q03519 686 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF91Q05481 1191 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 TCTN3Q6NUS6 607 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 ERAP2Q6P179 960 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 TNFAIP8L2Q6P589 184 aaPredicted RBP17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 LIPIQ6XZB0 460 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 TMPRSS11AQ6ZMR5 421 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 GDPGP1Q6ZNW5 385 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 NANOGP1Q8N7R0 232 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 VN1R2Q8NFZ6 395 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 OR9A1PQ8NGU1 263 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 MND1Q9BWT6 205 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 OR2B2Q9GZK3 357 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 SLAMF7Q9NQ25 335 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 MIEF1Q9NQG6 463 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 CCDC177Q9NQR7 707 aaPredicted RBP17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 STUB1Q9UNE7 303 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 MGAT4BQ9UQ53 548 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 ITM2BQ9Y287 266 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 C2orf16Q68DN1 1984 aa17.42■□□□□ 0.38
PCDHA1-202ENST00000394633 MFN2O95140 757 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 AZGP1P25311 298 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 PSMA1P25786 263 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 DGKGP49619 791 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 PAQR6Q6TCH4 344 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF517Q6ZMY9 492 aaPredicted RBP17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 IKBIPQ70UQ0 350 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 RBM45Q8IUH3 476 aaKnown RBP17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 TMEM19Q96HH6 336 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 WDFY2Q96P53 400 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 SRRQ9GZT4 340 aa17.41■□□□□ 0.38
PCDHA1-202ENST00000394633 A4GALTQ9NPC4 353 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms