RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PROS1P07225 676 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 ZNF10P21506 573 aaPredicted RBP14.11□□□□□ -0.15
CCT4-201ENST00000394440 BUD31P41223 144 aaPredicted RBP14.11□□□□□ -0.15
CCT4-201ENST00000394440 ITGA1P56199 1179 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 TP53BP2Q13625 1128 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 SPDYE7PQ495Y7 208 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 OR2T5Q6IEZ7 315 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 TSEN54Q7Z6J9 526 aaKnown RBP14.11□□□□□ -0.15
CCT4-201ENST00000394440 STK32CQ86UX6 486 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 ZC3H7AQ8IWR0 971 aaKnown RBP14.11□□□□□ -0.15
CCT4-201ENST00000394440 HS3ST5Q8IZT8 346 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 CSNK1A1LQ8N752 337 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 OR2T29Q8NH02 315 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 OSBPL10Q9BXB5 764 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 PADI2Q9Y2J8 665 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 SLC22A7Q9Y694 548 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 SDK1Q7Z5N4 2213 aa14.11□□□□□ -0.15
CCT4-201ENST00000394440 GNGT2O14610 69 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SDC3O75056 442 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SMNDC1O75940 238 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCT4-201ENST00000394440 OPN1SWP03999 348 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 TFPTP0C1Z6 253 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 C8orf89P0DMQ9 161 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 CDH3P22223 829 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 GPC1P35052 558 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 MAGEA8P43361 318 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 C14orf28Q4W4Y0 310 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 PRSS41Q7RTY9 318 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 CCDC116Q8IYX3 515 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SLC38A5Q8WUX1 472 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 TPD52L3Q96J77 140 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SLC35G5Q96KT7 338 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 CSF3RQ99062 836 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 LYRM4Q9HD34 91 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SEMA3GQ9NS98 782 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 ZCCHC3Q9NUD5 404 aaKnown RBP14.1□□□□□ -0.15
CCT4-201ENST00000394440 MS4A12Q9NXJ0 267 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 ARID1BQ8NFD5 2236 aaPredicted RBP14.1□□□□□ -0.15
CCT4-201ENST00000394440 hCG_2039718K7EN88 272 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 M0QX08 132 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SNAP29O95721 258 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 EIF2S1P05198 315 aaKnown RBP14.1□□□□□ -0.15
CCT4-201ENST00000394440 TDGF1P13385 188 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 CPN2P22792 545 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 FEN1P39748 380 aaKnown RBP14.1□□□□□ -0.15
CCT4-201ENST00000394440 OR52E8Q6IFG1 317 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 REEP3Q6NUK4 255 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 TSSK4Q6SA08 328 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 RDH12Q96NR8 316 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 SLC38A3Q99624 504 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 GIMAP4Q9NUV9 329 aa14.1□□□□□ -0.15
CCT4-201ENST00000394440 PI4KAP42356 2102 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 GALR3O60755 368 aaPredicted RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 PDGFBP01127 241 aaPredicted RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 C9P02748 559 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 GNAO1P09471 354 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 ALPPL2P10696 532 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 MYF6P23409 242 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 MPIP34949 423 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 PTGER1P34995 402 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 C21orf59P57076 290 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 VSX2P58304 361 aaPredicted RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 ADARB1P78563 741 aaKnown RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 PPP1R8Q12972 351 aaKnown RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 GPR19Q15760 415 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 SHQ1Q6PI26 577 aaKnown RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 USP51Q70EK9 711 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 PATL1Q86TB9 770 aaKnown RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 DNAJC22Q8N4W6 341 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 MOAP1Q96BY2 351 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 TMEM19Q96HH6 336 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 MAP3K3Q99759 626 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 GABARAPL1Q9H0R8 117 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 ZNF696Q9H7X3 374 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 ERVMER34-1Q9H9K5 563 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 IL21RQ9HBE5 538 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 PSME2Q9UL46 239 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 NINQ8N4C6 2090 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 PRAMEF27A3QJZ7 478 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 PRAMEF25A6NGN4 478 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 SLC9B1P1A6NJY1 282 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 BCHEP06276 602 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 CTSBP07858 339 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 CAPGP40121 348 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 ZXDAP98168 799 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 DEFB110Q30KQ9 67 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 HIPK1Q86Z02 1210 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 MIPOL1Q8TD10 442 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 RAB8BQ92930 207 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 SDCCAG3Q96C92 435 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 RAB33BQ9H082 229 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 OR51I1Q9H343 314 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 PRMT8Q9NR22 394 aaPredicted RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 THUMPD1Q9NXG2 353 aaKnown RBP14.09□□□□□ -0.15
CCT4-201ENST00000394440 ZNF780BQ9Y6R6 833 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 CABIN1Q9Y6J0 2220 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 SPTBP11277 2137 aa14.09□□□□□ -0.15
CCT4-201ENST00000394440 A0A1B0GVT2 93 aa14.08□□□□□ -0.15
CCT4-201ENST00000394440 ZNF860A6NHJ4 632 aa14.08□□□□□ -0.15
CCT4-201ENST00000394440 DIRAS1O95057 198 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms