RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 LMAN1LQ9HAT1 526 aa13.52□□□□□ -0.24
RNF41-202ENST00000394013 ZCCHC3Q9NUD5 404 aaKnown RBP13.52□□□□□ -0.24
RNF41-202ENST00000394013 KIF17Q9P2E2 1029 aa13.52□□□□□ -0.24
RNF41-202ENST00000394013 C3orf18Q9UK00 162 aa13.52□□□□□ -0.24
RNF41-202ENST00000394013 FFAR1O14842 300 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 VIPP01282 170 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 HOXC4P09017 264 aaPredicted RBP13.52□□□□□ -0.25
RNF41-202ENST00000394013 TFPTP0C1Z6 253 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 LASP1Q14847 261 aaKnown RBP13.52□□□□□ -0.25
RNF41-202ENST00000394013 RAB39AQ14964 217 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 DEFB110Q30KQ9 67 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 IFI44LQ53G44 452 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 C6orf141Q5SZD1 244 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 MRM1Q6IN84 353 aaKnown RBP13.52□□□□□ -0.25
RNF41-202ENST00000394013 PIWIL3Q7Z3Z3 882 aaKnown RBP13.52□□□□□ -0.25
RNF41-202ENST00000394013 QRFPRQ96P65 431 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 ZNF300Q96RE9 604 aaPredicted RBP13.52□□□□□ -0.25
RNF41-202ENST00000394013 BBS4Q96RK4 519 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 ORAI3Q9BRQ5 295 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 SPATA9Q9BWV2 254 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 EPB41L1Q9H4G0 881 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 CTPS2Q9NRF8 586 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 ACTR10Q9NZ32 417 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 PCOLCE2Q9UKZ9 415 aa13.52□□□□□ -0.25
RNF41-202ENST00000394013 TRIM64CA6NLI5 447 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 TNFRSF11BO00300 401 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 KCNJ13O60928 360 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 ABATP80404 500 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 SIM1P81133 766 aaPredicted RBP13.51□□□□□ -0.25
RNF41-202ENST00000394013 LSM11P83369 360 aaKnown RBP eCLIP13.51□□□□□ -0.25
RNF41-202ENST00000394013 TTC23Q5W5X9 447 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 LPCAT2Q7L5N7 544 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 TAF8Q7Z7C8 310 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 ABI3BPQ7Z7G0 1075 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 TSPYL5Q86VY4 417 aaPredicted RBP13.51□□□□□ -0.25
RNF41-202ENST00000394013 TTC29Q8NA56 475 aaPredicted RBP13.51□□□□□ -0.25
RNF41-202ENST00000394013 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 KLHL6Q8WZ60 621 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 NCSTNQ92542 709 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 ZBED6CLQ96FA7 236 aaPredicted RBP13.51□□□□□ -0.25
RNF41-202ENST00000394013 PRR14Q9BWN1 585 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 GABARAPL1Q9H0R8 117 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 FANCEQ9HB96 536 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 CES1P1Q9UKY3 287 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 PADI2Q9Y2J8 665 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 HEBP2Q9Y5Z4 205 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 SLC28A2O43868 658 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 NTN1O95631 604 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 NR4A1P22736 598 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 MC3RP41968 323 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 HLCSP50747 726 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 FUT5Q11128 374 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 ILF3Q12906 894 aaKnown RBP eCLIP13.51□□□□□ -0.25
RNF41-202ENST00000394013 ZNF630Q2M218 657 aaPredicted RBP13.51□□□□□ -0.25
RNF41-202ENST00000394013 CRB2Q5IJ48 1285 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 KIAA0895LQ68EN5 471 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 ZBTB46Q86UZ6 589 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 UTP15Q8TED0 518 aaKnown RBP13.51□□□□□ -0.25
RNF41-202ENST00000394013 RSC1A1Q92681 617 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 COL26A1Q96A83 441 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 OR2A5Q96R48 311 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 PCDH15Q96QU1 1955 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 SPAG17Q6Q759 2223 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 ASXL3Q9C0F0 2248 aa13.51□□□□□ -0.25
RNF41-202ENST00000394013 B4DGG1 531 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 PROM1O43490 865 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 HMGN2P05204 90 aaKnown RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 SERPINB1P30740 379 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 AHRP35869 848 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 RNF144AP50876 292 aaPredicted RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 TUBA4AP68366 448 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 CDK5R2Q13319 367 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 RUNX2Q13950 521 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 GPR107Q5VW38 600 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 XAF1Q6GPH4 301 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 FAHD1Q6P587 224 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 FIGLAQ6QHK4 219 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 ASPGQ86U10 573 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 GTPBP3Q969Y2 492 aaKnown RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 ZG16BQ96DA0 208 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 COL21A1Q96P44 957 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 PITHD1Q9GZP4 211 aaPredicted RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 WSB2Q9NYS7 404 aaPredicted RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 ADAM29Q9UKF5 820 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 SNX7Q9UNH6 387 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 ANGPT4Q9Y264 503 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 WDFY3Q8IZQ1 3526 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 C10orf142B7Z368 130 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 PRAMEF26H0Y7S4 382 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 SLC1A7O00341 560 aa13.5□□□□□ -0.25
RNF41-202ENST00000394013 CASC3O15234 703 aaKnown RBP13.5□□□□□ -0.25
RNF41-202ENST00000394013 FOXD2O60548 495 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms