RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 TRPS1Q9UHF7 1281 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 PCDHB1Q9Y5F3 818 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 AP1M2Q9Y6Q5 423 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 TTC28Q96AY4 2481 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 H3BM21 787 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 K7EQS6 105 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 KCNK5O95279 499 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 FAM157BP0CG42 384 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 PSMA1P25786 263 aaKnown RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 CTHP32929 405 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 S100A3P33764 101 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 GPC1P35052 558 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 CRYBB2P43320 205 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 IDH2P48735 452 aaKnown RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 CLCN7P51798 805 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 SEC13P55735 322 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 PER3P56645 1201 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 CLDN8P56748 225 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 RRAS2P62070 204 aaPredicted RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 RHAGQ02094 409 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 RGS1Q08116 209 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 SLC14A1Q13336 389 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 ZNF234Q14588 700 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 PTCHD3Q3KNS1 767 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 CLVS2Q5SYC1 327 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 CACUL1Q86Y37 369 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 GALNT11Q8NCW6 608 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 MDGA1Q8NFP4 955 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 TTLQ8NG68 377 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 VANGL1Q8TAA9 524 aaPredicted RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 CREB3L4Q8TEY5 395 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 UBTD2Q8WUN7 234 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 GPR137Q96N19 417 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 FEVQ99581 238 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 CCM2Q9BSQ5 444 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 NTMT1Q9BV86 223 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 SPATA9Q9BWV2 254 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 SLC29A3Q9BZD2 475 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 ZDHHC6Q9H6R6 413 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 TRIM45Q9H8W5 580 aaPredicted RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 LRTM1Q9HBL6 345 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 ABCB9Q9NP78 766 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 POLMQ9NP87 494 aaPredicted RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 SNTG1Q9NSN8 517 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 RBFOX1Q9NWB1 397 aaKnown RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 MRPL39Q9NYK5 338 aaKnown RBP10.61□□□□□ -0.71
CUX1-204ENST00000393824 TAS2R16Q9NYV7 291 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 SEC14L4Q9UDX3 406 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 SLC25A13Q9UJS0 675 aa10.61□□□□□ -0.71
CUX1-204ENST00000393824 KIAA1549LQ6ZVL6 1849 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 MYL12BO14950 172 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 GPR39O43194 453 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 ULK1O75385 1050 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 ADRA2AP08913 450 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 EBLN1P0CF75 366 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 BCKDHAP12694 445 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 ANXA8P13928 327 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 GPX2P18283 190 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 MYL12AP19105 171 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 MAP2K3P46734 347 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 ABRQ12979 859 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 DOC2BQ14184 412 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 LCN1P1Q5VSP4 162 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 PLAG1Q6DJT9 500 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 TEX261Q6UWH6 196 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 HSDL2Q6YN16 418 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 KIF18BQ86Y91 864 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 OR8H1Q8NGG4 311 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 PIH1D2Q8WWB5 315 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 SLC25A46Q96AG3 418 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 TOE1Q96GM8 510 aaKnown RBP10.6□□□□□ -0.71
CUX1-204ENST00000393824 MARVELD1Q9BSK0 173 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 RACGAP1Q9H0H5 632 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 P2RY12Q9H244 342 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
CUX1-204ENST00000393824 FARSBQ9NSD9 589 aaKnown RBP10.6□□□□□ -0.71
CUX1-204ENST00000393824 POFUT2Q9Y2G5 429 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 U3KQ87 197 aa10.6□□□□□ -0.71
CUX1-204ENST00000393824 MUC22E2RYF6 1773 aaPredicted RBP10.6□□□□□ -0.71
CUX1-204ENST00000393824 PRR23AA6NEV1 266 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 A8MVJ9 347 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 ANKRD66B4E2M5 251 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 FFAR2O15552 330 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 NDUFA2O43678 99 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 HCN1O60741 890 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 SLC43A1O75387 559 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 LEFTY1O75610 366 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 RFPL3O75679 317 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 FHP07954 510 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 PRPS2P11908 318 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 PIPP12273 146 aaPredicted RBP10.59□□□□□ -0.71
CUX1-204ENST00000393824 TNNI3P19429 210 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 MC4RP32245 332 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 CDKN2CP42773 168 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 CLDN20P56880 219 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 HMGCS1Q01581 520 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 BAMBIQ13145 260 aa10.59□□□□□ -0.71
CUX1-204ENST00000393824 VEZF1Q14119 521 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms