RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CLGNO14967 610 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 EPPINO95925 133 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 TIMP3P35625 211 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 HSPA7P48741 367 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 MGAT5Q09328 741 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 DUSP8Q13202 625 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 MAATS1Q7Z4T9 603 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 OR4N5Q8IXE1 308 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
CHMP3-202ENST00000393773 PDIK1LQ8N165 341 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 LIX1Q8N485 282 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 PDPRQ8NCN5 879 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 FAM13CQ8NE31 585 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 ZNF473Q8WTR7 871 aaKnown RBP14.11□□□□□ -0.15
CHMP3-202ENST00000393773 ESAMQ96AP7 390 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 LRRC39Q96DD0 335 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 ZNF597Q96LX8 424 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 DGAT2Q96PD7 388 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 PRDM14Q9GZV8 571 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 DDX47Q9H0S4 455 aaKnown RBP14.11□□□□□ -0.15
CHMP3-202ENST00000393773 PLEKHF2Q9H8W4 249 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 CNIH4Q9P003 139 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 MTRF1LQ9UGC7 380 aaKnown RBP14.11□□□□□ -0.15
CHMP3-202ENST00000393773 FOXD3Q9UJU5 478 aaPredicted RBP14.11□□□□□ -0.15
CHMP3-202ENST00000393773 PPP2R2CQ9Y2T4 447 aa14.11□□□□□ -0.15
CHMP3-202ENST00000393773 C15orf38-AP3S2A0A0A6YYH1 394 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 A0A1B0GTL3 188 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 TRIM3O75382 744 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-202ENST00000393773 CLPSP04118 112 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 CPN2P22792 545 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 GDF1P27539 372 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 HOXC12P31275 282 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 MSH2P43246 934 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 PLIN5Q00G26 463 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 MORF4L2Q15014 288 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 EBPQ15125 230 aaKnown RBP14.1□□□□□ -0.15
CHMP3-202ENST00000393773 OR4D1Q15615 310 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 TBCCQ15814 346 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 NTRK2Q16620 822 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 SPATA6LQ8N4H0 392 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 SNX31Q8N9S9 440 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 SRFBP1Q8NEF9 429 aaKnown RBP14.1□□□□□ -0.15
CHMP3-202ENST00000393773 HSPBAP1Q96EW2 488 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 LRRC46Q96FV0 321 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 VPS39Q96JC1 886 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 C18orf12Q96KH6 178 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 GAL3ST4Q96RP7 486 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 OSBPL9Q96SU4 736 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 DOHHQ9BU89 302 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 WWTR1Q9GZV5 400 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 UBQLN3Q9H347 655 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 RHOJQ9H4E5 214 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 CNOT10Q9H9A5 744 aaKnown RBP14.1□□□□□ -0.15
CHMP3-202ENST00000393773 ZNF629Q9UEG4 869 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-202ENST00000393773 SPACA6W5XKT8 324 aa14.1□□□□□ -0.15
CHMP3-202ENST00000393773 RAI1Q7Z5J4 1906 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 A0A1W2PPR1 153 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 AHRRA9YTQ3 701 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 PRKRAO75569 313 aaKnown RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 STK16O75716 305 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 C1QAP02745 245 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 EPXP11678 715 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 SSR2P43308 183 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 HERVK_113P63132 956 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 ERVK-8P63133 956 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 SORDQ00796 357 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 TNFRSF17Q02223 184 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 KEAP1Q14145 624 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 FASTKD3Q14CZ7 662 aaKnown RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 SPRED3Q2MJR0 410 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 TMEM35AQ53FP2 167 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 PAGE2BQ5JRK9 111 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 CDKL4Q5MAI5 379 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 NSUN5P2Q63ZY6 315 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 Q71RC1 249 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 ANKMY2Q8IV38 441 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 LAS2Q8IYD9 372 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 PPWD1Q96BP3 646 aaKnown RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 ART5Q96L15 291 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 JSRP1Q96MG2 331 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 TIMP4Q99727 224 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 SORBS1Q9BX66 1292 aaKnown RBP14.09□□□□□ -0.15
CHMP3-202ENST00000393773 ERVK-6Q9BXR3 956 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 MOCS1Q9NZB8 636 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 JKAMPQ9P055 326 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 ERVK-19Q9WJR5 959 aa14.09□□□□□ -0.15
CHMP3-202ENST00000393773 MBD3L4A6NDZ8 208 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 MBD3L3A6NE82 208 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 TUBAL3A6NHL2 446 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 MBD3L5A6NJ08 208 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 CLCA1A8K7I4 914 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SAP18O00422 153 aaKnown RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 TP73O15350 636 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SH3BGRLO75368 114 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 GOSR1O95249 250 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 IL2RAP01589 272 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 CD1DP15813 335 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 ALOX15P16050 662 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SERPINB3P29508 390 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms