RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TRIM69Q86WT6 500 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 OR8H2Q8N162 312 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 CACTIN-AS1Q8N1I8 211 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 NANOGP1Q8N7R0 232 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 OR8J1Q8NGP2 316 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 SETD6Q8TBK2 473 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 GPR151Q8TDV0 419 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 TMCO6Q96DC7 493 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 WFDC6Q9BQY6 131 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 POLR2J3Q9H1A7 115 aaKnown RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 DPEP2Q9H4A9 486 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 SIRT3Q9NTG7 399 aaPredicted RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 NDUFB11Q9NX14 153 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 ACAD8Q9UKU7 415 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 STUB1Q9UNE7 303 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 C17orf113A0A1B0GUU1 675 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 ZNF670-ZNF695F2Z2N8 137 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 HMGN4O00479 90 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 CCNKO75909 580 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 SEMA3DO95025 777 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 PSMA1P25786 263 aaKnown RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 OR2B6P58173 313 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 KHDRBS2Q5VWX1 349 aaKnown RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 RAET1GQ6H3X3 334 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 SLC39A5Q6ZMH5 540 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 FAM83HQ6ZRV2 1179 aaPredicted RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 Q8N9G6 341 aaPredicted RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 ZNF354BQ96LW1 612 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 TSSK6Q9BXA6 273 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 NEK6Q9HC98 313 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 HEPACAM2A8MVW5 462 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 CACNB4O00305 520 aaPredicted RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 RGS5O15539 181 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 TP53P04637 393 aaPredicted RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 BSGP35613 385 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 GPR1P46091 355 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 RORCP51449 518 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 EPHA5P54756 1037 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 OCLNQ16625 522 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 PDE4DIPQ5VU43 2346 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 RSBN1Q5VWQ0 802 aaPredicted RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 BCDIN3DQ7Z5W3 292 aaKnown RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 UBQLNLQ8IYU4 475 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 NATD1Q8N6N6 113 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 TCEANCQ8N8B7 351 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 PROKR2Q8NFJ6 384 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 OR2L2Q8NH16 312 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 NUS1Q96E22 293 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 DEFB118Q96PH6 123 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 TEFMQ96QE5 360 aaKnown RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 F2RL3Q96RI0 385 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 ACAT2Q9BWD1 397 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 RHBGQ9H310 441 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 NEUROD4Q9HD90 331 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 SEMA3GQ9NS98 782 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 MUTYHQ9UIF7 546 aa17.88■□□□□ 0.45
CBX1-202ENST00000393408 WBP11Q9Y2W2 641 aaKnown RBP17.88■□□□□ 0.45
CBX1-202ENST00000393408 HYKKA2RU49 373 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ANHXE9PGG2 379 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 CAPN5O15484 640 aaPredicted RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 TPST2O60704 377 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ITGB7P26010 798 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 VASPP50552 380 aaPredicted RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 PCBP4P57723 403 aaKnown RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 WDR5P61964 334 aaKnown RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 HSPB3Q12988 150 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 NRARPQ7Z6K4 114 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 IL17RCQ8NAC3 791 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 GALNT6Q8NCL4 622 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 OR5AR1Q8NGP9 310 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 SLC7A13Q8TCU3 470 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 CAPSLQ8WWF8 208 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ZNF514Q96K75 400 aaPredicted RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 WDFY2Q96P53 400 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 MS4A8Q9BY19 250 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 OR52A5Q9H2C5 316 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 SNTG1Q9NSN8 517 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 C5AR2Q9P296 337 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ASF1AQ9Y294 204 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 WWP2O00308 870 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 UGT2B17O75795 530 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 PTPN2P17706 415 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 FRKP42685 505 aaPredicted RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 HTR3AP46098 478 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 CNTN1Q12860 1018 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 MLLT11Q13015 90 aaPredicted RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 HEPACAMQ14CZ8 416 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ZNF544Q6NX49 715 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ZNF765Q7L2R6 523 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 ANKRD53Q8N9V6 530 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 SMPDL3AQ92484 453 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 RAD51AP1Q96B01 352 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 POLR2J2Q9GZM3 115 aaKnown RBP17.87■□□□□ 0.45
CBX1-202ENST00000393408 TBX21Q9UL17 535 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 HCFC2Q9Y5Z7 792 aa17.87■□□□□ 0.45
CBX1-202ENST00000393408 SLC35F4A4IF30 521 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 SH3BP5O60239 455 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 CYP7B1O75881 506 aa17.86■□□□□ 0.45
CBX1-202ENST00000393408 DDX5P17844 614 aaKnown RBP17.86■□□□□ 0.45
CBX1-202ENST00000393408 COPZ1P61923 177 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms