RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RFX2P48378 723 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 DGKQP52824 942 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 UBXN2BQ14CS0 331 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SAMD4BQ5PRF9 694 aaKnown RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 PRPF38BQ5VTL8 546 aaKnown RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 YIPF7Q8N8F6 280 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 CHDHQ8NE62 594 aaPredicted RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 OR8H1Q8NGG4 311 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 OR2T11Q8NH01 316 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 METTL6Q8TCB7 284 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 TMCO6Q96DC7 493 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 PKP4Q99569 1192 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SDHCQ99643 169 aaPredicted RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 APOL4Q9BPW4 351 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 BTBD1Q9H0C5 482 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 OR52A5Q9H2C5 316 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SPNS1Q9H2V7 528 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 ZNF639Q9UID6 485 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 ELF5Q9UKW6 265 aaPredicted RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 PNMA8BQ9ULN7 279 aaPredicted RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 PCDHGB1Q9Y5G3 927 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 A3GALT2U3KPV4 340 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 C17orf113A0A1B0GUU1 675 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 AQP12BA6NM10 295 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 FFAR3O14843 346 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 GPR42O15529 346 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 ALDOCP09972 364 aaKnown RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 UROSP10746 265 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 ACADLP28330 430 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 PFN3P60673 137 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 TCEA2Q15560 299 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SGCAQ16586 387 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 MILR1Q7Z6M3 343 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 AQP12AQ8IXF9 295 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 ZNF680Q8NEM1 530 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 HMGCLL1Q8TB92 370 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SETD6Q8TBK2 473 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 HHIPQ96QV1 700 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 OR2A14Q96R47 310 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 APOOQ9BUR5 198 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SPATA9Q9BWV2 254 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 ZDHHC5Q9C0B5 715 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 TINAGL1Q9GZM7 467 aaPredicted RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 C6orf62Q9GZU0 229 aaPredicted RBP18.07■□□□□ 0.48
CCDC50-202ENST00000392456 POLG2Q9UHN1 485 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 HSPB11Q9Y547 144 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 SDK1Q7Z5N4 2213 aa18.07■□□□□ 0.48
CCDC50-202ENST00000392456 NRP2O60462 931 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 WDR47O94967 919 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 MED26O95402 600 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 FCGR1AP12314 374 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 SLC15A1P46059 708 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 EMX1Q04741 257 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 STX5Q13190 355 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 FAM160A2Q8N612 972 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 RLN3Q8WXF3 142 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 SGTBQ96EQ0 304 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 SLC32A1Q9H598 525 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 C6orf106Q9H6K1 298 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 PHPT1Q9NRX4 125 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 CYP8B1Q9UNU6 501 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 PCDHB3Q9Y5E6 796 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 UGT2B17O75795 530 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 ACP5P13686 325 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 EPB42P16452 691 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 PXNP49023 591 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 UGT2B15P54855 530 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 ERVK-8P63133 956 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 ZP2Q05996 745 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 ZIK1Q3SY52 487 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 TFAP2EQ6VUC0 442 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 UTP15Q8TED0 518 aaKnown RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 ATOH1Q92858 354 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 BMFQ96LC9 184 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 NXF2Q9GZY0 626 aaKnown RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 STOX2Q9P2F5 926 aaPredicted RBP18.06■□□□□ 0.48
CCDC50-202ENST00000392456 KLHL21Q9UJP4 597 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 MKLN1Q9UL63 735 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 PCDHGB2Q9Y5G2 931 aa18.06■□□□□ 0.48
CCDC50-202ENST00000392456 DMDP11532 3685 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 FAM170BA6NMN3 283 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 GATCO43716 136 aaKnown RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 OTCP00480 354 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 IMPA1P29218 277 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 CDKL4Q5MAI5 379 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 LRFN4Q6PJG9 635 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 Q6ZSR9 355 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 C8orf59Q8N0T1 100 aaPredicted RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 RORBQ92753 470 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 RPL3LQ92901 407 aaKnown RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 TUBGCP3Q96CW5 907 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 GTPBP2Q9BX10 602 aaKnown RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 DCSTAMPQ9H295 470 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 FGF22Q9HCT0 170 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 USP36Q9P275 1121 aaKnown RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 CCDC182A6NF36 153 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 NUPL2O15504 423 aaKnown RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 CATP04040 527 aaKnown RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 HNMTP50135 292 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 NAE1Q13564 534 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms