RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ERVK-8P63133 956 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 FOXO1Q12778 655 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 ACAP2Q15057 778 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 PRAMEF20Q5VT98 475 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 LIPJQ5W064 366 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 ADGRD1Q6QNK2 874 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 LYPD8Q6UX82 237 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 GK5Q6ZS86 529 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 ZCCHC7Q8N3Z6 543 aaKnown RBP15.32■□□□□ 0.04
PTPRK-208ENST00000392449 OR5L2Q8NGL0 311 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 GAL3ST4Q96RP7 486 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 FAM173AQ9BQD7 235 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 ERVK-6Q9BXR3 956 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 IPPKQ9H8X2 491 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 SACM1LQ9NTJ5 587 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 COQ3Q9NZJ6 369 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 ERVK-19Q9WJR5 959 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 ASB4Q9Y574 426 aa15.32■□□□□ 0.04
PTPRK-208ENST00000392449 PHF3Q92576 2039 aaKnown RBP15.32■□□□□ 0.04
PTPRK-208ENST00000392449 A0A0A6YYD5 115 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 ATP6AP2A0A1C7CYW4 349 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 OR7A17O14581 309 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 PROM1O43490 865 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 ATP6AP2O75787 350 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 ALOX15P16050 662 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 TYK2P29597 1187 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 SERPINB8P50452 374 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 NUP107P57740 925 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 PLIN5Q00G26 463 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 PMPCAQ10713 525 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 ZNF791Q3KP31 576 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 PIGGQ5H8A4 983 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 TECRLQ5HYJ1 363 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 MRM1Q6IN84 353 aaKnown RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 OPN5Q6U736 354 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 MEX3BQ6ZN04 569 aaKnown RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 RPS27LQ71UM5 84 aaKnown RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 SLC22A16Q86VW1 577 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 EID3Q8N140 333 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 GOLM1Q8NBJ4 401 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 OR52B6Q8NGF0 335 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 RBM18Q96H35 190 aaKnown RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 NSUN5Q96P11 429 aaKnown RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 SMC6Q96SB8 1091 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 TP63Q9H3D4 680 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 NPDC1Q9NQX5 325 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-208ENST00000392449 ADGRE2Q9UHX3 823 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 PHF11Q9UIL8 331 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 PCDHGA11Q9Y5H2 935 aa15.31■□□□□ 0.04
PTPRK-208ENST00000392449 H0YIV9 168 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 ACSL3O95573 720 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 AIFM1O95831 613 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 CLPSP04118 112 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 P04436 131 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 FAM58BPP0C7Q3 252 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 ARL1P40616 181 aaPredicted RBP15.3■□□□□ 0.04
PTPRK-208ENST00000392449 ZNF267Q14586 743 aaPredicted RBP15.3■□□□□ 0.04
PTPRK-208ENST00000392449 PCBP2Q15366 365 aaKnown RBP eCLIP15.3■□□□□ 0.047e-7■■■□□ 15.4
PTPRK-208ENST00000392449 MPEG1Q2M385 716 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 GXYLT1Q4G148 440 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 PTGR2Q8N8N7 351 aaPredicted RBP15.3■□□□□ 0.04
PTPRK-208ENST00000392449 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 NUBPLQ8TB37 319 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 WDR20Q8TBZ3 569 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 TANKQ92844 425 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 PHF21BQ96EK2 531 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 FBXL20Q96IG2 436 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 CENPKQ9BS16 269 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 ENKD1Q9H0I2 346 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 ACSS3Q9H6R3 686 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 NOL11Q9H8H0 719 aaKnown RBP15.3■□□□□ 0.04
PTPRK-208ENST00000392449 IL1RL2Q9HB29 575 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 SH2D2AQ9NP31 389 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 MS4A12Q9NXJ0 267 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 ITGB1BP2Q9UKP3 347 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 CCDC168Q8NDH2 2452 aa15.3■□□□□ 0.04
PTPRK-208ENST00000392449 INTS1Q8N201 2190 aaKnown RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 PGRMC2O15173 223 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 OR10H2O60403 315 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 GPR75O95800 540 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 RFPL3SP0C7P2 107 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 NR2F6P10588 404 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 PTX3P26022 381 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 BUD31P41223 144 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 NDUFAF5Q5TEU4 345 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 ZNF585AQ6P3V2 769 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 KLC3Q6P597 504 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 CYP20A1Q6UW02 462 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 TMEM64Q6YI46 380 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 TRILQ7L0X0 811 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 ST13P4Q8IZP2 240 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 FAM109AQ8N4B1 249 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 L3MBTL4Q8NA19 623 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 ACBD4Q8NC06 268 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 OR10G3Q8NGC4 313 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 RND1Q92730 232 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 SGCZQ96LD1 299 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 C16orf45Q96MC5 204 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-208ENST00000392449 SPOCK3Q9BQ16 436 aa15.29■□□□□ 0.04
PTPRK-208ENST00000392449 CDC42EP4Q9H3Q1 356 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms