RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CCM2Q9BSQ5 444 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 PLEKHA6Q9Y2H5 1048 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 CCDC88AQ3V6T2 1871 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 KRT33AO76009 404 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 PCSK6P29122 969 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 IGFALSP35858 605 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 RASGEF1BQ0VAM2 473 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 GPRC6AQ5T6X5 926 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 PLAG1Q6DJT9 500 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 OR5H6Q8NGV6 325 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 C13orf42A0A1B0GVH6 325 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 RGS9O75916 674 aaPredicted RBP18.87■□□□□ 0.61
SHANK1-203ENST00000391813 RASGRP1O95267 797 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 ALPIP09923 528 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 SMIM18P0DKX4 95 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 GALEQ14376 348 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 TMEM69Q5SWH9 247 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 PARGQ86W56 976 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 YIPF7Q8N8F6 280 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 CLCC1Q96S66 551 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 PCDHB14Q9Y5E9 798 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 MYH3P11055 1940 aa18.87■□□□□ 0.61
SHANK1-203ENST00000391813 FAM72CH0Y354 149 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 FUCA1P04066 466 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 PUM1Q14671 1186 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHANK1-203ENST00000391813 GPR19Q15760 415 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 COL28A1Q2UY09 1125 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 FAM72AQ5TYM5 149 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 FAM72DQ6L9T8 149 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 RPL13AP3Q6NVV1 102 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 FAM122CQ6P4D5 195 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 TPRG1Q6ZUI0 275 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 OSTM1Q86WC4 334 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 FAM72BQ86X60 149 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 LACC1Q8IV20 430 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 ABCG4Q9H172 646 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 TAS2R8Q9NYW2 309 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 CNOT2Q9NZN8 540 aaKnown RBP18.86■□□□□ 0.61
SHANK1-203ENST00000391813 CREB5Q02930 508 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 ILF3Q12906 894 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHANK1-203ENST00000391813 VEZF1Q14119 521 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 ATXN7L3Q14CW9 347 aaPredicted RBP18.86■□□□□ 0.61
SHANK1-203ENST00000391813 OR4D1Q15615 310 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 OCLNQ16625 522 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 UAP1L1Q3KQV9 507 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 OR5P2Q8WZ92 322 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 TXNDC15Q96J42 360 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 NECTIN4Q96NY8 510 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 YIPF4Q9BSR8 244 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 OR51E2Q9H255 320 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 CRTAC1Q9NQ79 661 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 PADI2Q9Y2J8 665 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 NUBP2Q9Y5Y2 271 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 LOC285095A0A1B0GVY8 99 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 CDK1P06493 297 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 HTR1AP08908 422 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 RGS6P49758 472 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 BCL7AQ4VC05 210 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 NHSL2Q5HYW2 709 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 OR52B6Q8NGF0 335 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 GATAD2BQ8WXI9 593 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 GNG8Q9UK08 70 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 A0A1W2PQ09 198 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 JUNP05412 331 aaKnown RBP18.86■□□□□ 0.61
SHANK1-203ENST00000391813 TFPIP10646 304 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 GGT2P36268 569 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 MTNR1AP48039 350 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 MC1RQ01726 317 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 MS4A13Q5J8X5 152 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 PLEKHS1Q5SXH7 462 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 VTCN1Q7Z7D3 282 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 PTERQ96BW5 349 aa18.86■□□□□ 0.61
SHANK1-203ENST00000391813 KDELR3O43731 214 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 JRKO75564 520 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 PDYNP01213 254 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ALPLP05186 524 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 JUNBP17275 347 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 CNR2P34972 360 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 LRRC32Q14392 662 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 PTPRCAPQ14761 206 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 METTL11BQ5VVY1 283 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 SLC44A3Q8N4M1 653 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 EPYCQ99645 322 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 SFXN1Q9H9B4 322 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 BACE2Q9Y5Z0 518 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ENPP4Q9Y6X5 453 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 ADH5P11766 374 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 BMP4P12644 408 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 RPL35P42766 123 aaKnown RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 LRRC69Q6ZNQ3 347 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 AMZ2Q86W34 360 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 HDDC3Q8N4P3 179 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 PROKR2Q8NFJ6 384 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 TSTD1Q8NFU3 115 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 MYOCQ99972 504 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 RETREG1Q9H6L5 497 aa18.85■□□□□ 0.61
SHANK1-203ENST00000391813 MARCH4Q9P2E8 410 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 HEMK1Q9Y5R4 338 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 MBLAC1A4D2B0 266 aaPredicted RBP18.85■□□□□ 0.61
SHANK1-203ENST00000391813 MYADML2A6NDP7 307 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms