RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PSME2Q9UL46 239 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 ZMIZ1Q9ULJ6 1067 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 PTPRQQ9UMZ3 2332 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 A8MUA0 341 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 MASP2O00187 686 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 SHOX2O60902 331 aaPredicted RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 COX6A1P12074 109 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 IDO1P14902 403 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 PRPS1L1P21108 318 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 PIK3R1P27986 724 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 FEN1P39748 380 aaKnown RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 ARFIP2P53365 341 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 CLDN8P56748 225 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 OR4D2P58180 307 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 DUSP2Q05923 314 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 PDE7AQ13946 482 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 SERTAD2Q14140 314 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 SFT2D3Q587I9 215 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 CPLX4Q7Z7G2 160 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 RAB43Q86YS6 212 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 ZSCAN1Q8NBB4 408 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 OR7A2PQ8NGA2 310 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 PPWD1Q96BP3 646 aaKnown RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 CNRIP1Q96F85 164 aaPredicted RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 ZNF681Q96N22 645 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 CATSPER2Q96P56 530 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 ELAC2Q9BQ52 826 aaKnown RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 WDR77Q9BQA1 342 aaPredicted RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 PNO1Q9NRX1 252 aaKnown RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 P4HTMQ9NXG6 502 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 TAS2R7Q9NYW3 318 aa11.86□□□□□ -0.51
SMN1-202ENST00000380707 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
SMN1-202ENST00000380707 EPG5Q9HCE0 2579 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 IGHV1-45A0A0A0MS14 117 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 A0A1W2PQ72 361 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 SRRM3A6NNA2 597 aaPredicted RBP11.85□□□□□ -0.51
SMN1-202ENST00000380707 K7ENP7 123 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 PCDH17O14917 1159 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 IFNA16P05015 189 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 SLC35E2P0CK97 266 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 CPMP14384 443 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 HPCAL1P37235 193 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 STT3AP46977 705 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 C21orf58P58505 322 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 UFM1P61960 85 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 CDC20Q12834 499 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 PCOLCEQ15113 449 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 GSTA3Q16772 222 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 MPEG1Q2M385 716 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 ZNF385BQ569K4 471 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 INO80CQ6PI98 192 aaPredicted RBP11.85□□□□□ -0.51
SMN1-202ENST00000380707 DGAT2L6Q6ZPD8 337 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 SPATA21Q7Z572 469 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 C10orf82Q8WW14 230 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 RBM18Q96H35 190 aaKnown RBP11.85□□□□□ -0.51
SMN1-202ENST00000380707 DPY30Q9C005 99 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 ZNF700Q9H0M5 742 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 EPN3Q9H201 632 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 SLC35C2Q9NQQ7 365 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 SDR39U1Q9NRG7 319 aaPredicted RBP11.85□□□□□ -0.51
SMN1-202ENST00000380707 SH3BP4Q9P0V3 963 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 FBXL4Q9UKA2 621 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 ZNF780BQ9Y6R6 833 aa11.85□□□□□ -0.51
SMN1-202ENST00000380707 SPENQ96T58 3664 aaKnown RBP11.85□□□□□ -0.51
SMN1-202ENST00000380707 PEX12O00623 359 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 TBX19O60806 448 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 LAMP1P11279 417 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 COX7A2P14406 83 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 PORP16435 677 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 IL12AP29459 219 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 PTGER1P34995 402 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 UCNP55089 124 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 BIKQ13323 160 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 RPS6KA2Q15349 733 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 CEBPEQ15744 281 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 PDCD4Q53EL6 469 aaKnown RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 CPTPQ5TA50 214 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 CPZQ66K79 652 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 NDUFAF7Q7L592 441 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 R3HCC1LQ7Z5L2 792 aaKnown RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 CCDC116Q8IYX3 515 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 ST13P4Q8IZP2 240 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 FAM9CQ8IZT9 166 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 PTPMT1Q8WUK0 201 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 THAP4Q8WY91 577 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 CIDECQ96AQ7 238 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 PPCDCQ96CD2 204 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 ZNF764Q96H86 408 aaPredicted RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 IP6K3Q96PC2 410 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 DGAT2Q96PD7 388 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 NSRP1Q9H0G5 558 aaKnown RBP11.84□□□□□ -0.51
SMN1-202ENST00000380707 ADAP2Q9NPF8 381 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 SLAMF7Q9NQ25 335 aa11.84□□□□□ -0.51
SMN1-202ENST00000380707 COPG1Q9Y678 874 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms