RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TPD52L3Q96J77 140 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 OSBPL11Q9BXB4 747 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 Q9H521 79 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 LYRM4Q9HD34 91 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 A4GALTQ9NPC4 353 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 C8orf4Q9NR00 106 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 ZCCHC3Q9NUD5 404 aaKnown RBP16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 ZSCAN32Q9NX65 697 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 LRIT1Q9P2V4 623 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 CSNK1G3Q9Y6M4 447 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 ARID1BQ8NFD5 2236 aaPredicted RBP16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 PI4KAP42356 2102 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 RHPN2P1A8MT19 583 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 HMGN4O00479 90 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 SUV39H1O43463 412 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 SIM1P81133 766 aaPredicted RBP16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 MYBPC3Q14896 1274 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 MAPK11Q15759 364 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 IQCCQ4KMZ1 466 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 FKBP9P1Q75LS8 142 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 SLC38A5Q8WUX1 472 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 TCTN2Q96GX1 697 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 TGM7Q96PF1 710 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 ADPRHL2Q9NX46 363 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 VNN3Q9NY84 501 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 PSME2Q9UL46 239 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF780BQ9Y6R6 833 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 hCG_2039718K7EN88 272 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 M0QX08 132 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 TFPTP0C1Z6 253 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 ALDH4A1P30038 563 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 MPIP34949 423 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 GABRA4P48169 554 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 EPHA4P54764 986 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 SELENOWP63302 87 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 PPP1R8Q12972 351 aaKnown RBP16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 BLMHQ13867 455 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 PRTGQ2VWP7 1150 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 ZC3H12BQ5HYM0 836 aaKnown RBP16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 CRB2Q5IJ48 1285 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 OTUD3Q5T2D3 398 aaPredicted RBP16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 OR52E8Q6IFG1 317 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 UGT2A3Q6UWM9 527 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 TMEM107Q6UX40 140 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 SZRD1Q7Z422 152 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 TMEM179BQ7Z7N9 219 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 CHERPQ8IWX8 916 aaKnown RBP16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 OR9A2Q8NGT5 310 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 SFXN5Q8TD22 340 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 MAGEE2Q8TD90 523 aaPredicted RBP16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 EDAQ92838 391 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 MAGED4Q96JG8 741 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 C7orf34Q96L11 122 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 CNBD2Q96M20 576 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 ELF4Q99607 663 aaPredicted RBP16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 DOHHQ9BU89 302 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 SEMA3GQ9NS98 782 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 MS4A12Q9NXJ0 267 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 SPTBP11277 2137 aa16.35■□□□□ 0.21
THUMPD2-201ENST00000378727 IGHV5-51A0A0C4DH38 117 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 GNGT2O14610 69 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 LAMTOR5O43504 91 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 MED26O95402 600 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 FABP3P05413 133 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 LYNP07948 512 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 LTB4RQ15722 352 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 OR4N5Q8IXE1 308 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 HS3ST5Q8IZT8 346 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 ARL10Q8N8L6 244 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 TMEM52Q8NDY8 209 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 GAB3Q8WWW8 586 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 NCSTNQ92542 709 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 N4BP2L2Q92802 583 aaPredicted RBP16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 TBC1D20Q96BZ9 403 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 SLC35G5Q96KT7 338 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 RAB33BQ9H082 229 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 OR51I1Q9H343 314 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 EPHA6Q9UF33 1036 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 PILRBQ9UKJ0 227 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 ANGPT4Q9Y264 503 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 PRAMEF27A3QJZ7 478 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 TLCD2A6NGC4 264 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 G3V2T6 193 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 CYR61O00622 381 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 BCHEP06276 602 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 MYF5P13349 255 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 TLX1P31314 330 aaPredicted RBP16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 RXRGP48443 463 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 PPM1FP49593 454 aaPredicted RBP16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 ARSFP54793 590 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 OR1D5P58170 312 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 CSTF1Q05048 431 aaKnown RBP16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 RPS26P11Q5JNZ5 115 aaPredicted RBP16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 REEP3Q6NUK4 255 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 TSEN54Q7Z6J9 526 aaKnown RBP16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 STK32CQ86UX6 486 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 SLC30A8Q8IWU4 369 aa16.34■□□□□ 0.21
THUMPD2-201ENST00000378727 CA13Q8N1Q1 262 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms