RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 AHSPQ9NZD4 102 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 DNAJC27Q9NZQ0 273 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 MYO15AQ9UKN7 3530 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 EYSQ5T1H1 3165 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 REV3LO60673 3130 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 A0A0C4DFX4 3053 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 WASHC1A8K0Z3 465 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 C5orf58C9J3I9 102 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 ANHXE9PGG2 379 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 H7BY64 318 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 TLR4O00206 839 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 SLC9A3R1O14745 358 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 HAT1O14929 419 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 PPM1DO15297 605 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 CAPN5O15484 640 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 PDPK1O15530 556 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 HOXC11O43248 304 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 VEGFDO43915 354 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 CD72P21854 359 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 S100A5P33763 92 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 VIPR2P41587 438 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 KCNJ5P48544 419 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 VEGFBP49765 207 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 TPTEP56180 551 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 SNRPGP62308 76 aaKnown RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 CNTN1Q12860 1018 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 SLX4IPQ5VYV7 408 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 WASH2PQ6VEQ5 465 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 ERN2Q76MJ5 926 aaKnown RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 SPRED2Q7Z698 418 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 UBE3DQ7Z6J8 389 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 DCUN1D3Q8IWE4 304 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 CELF5Q8N6W0 485 aaKnown RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 VANGL1Q8TAA9 524 aaPredicted RBP10.37□□□□□ -0.75
BEST1-201ENST00000378043 SLC7A13Q8TCU3 470 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 COX14Q96I36 57 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 PRAP1Q96NZ9 151 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 LGR4Q9BXB1 951 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 KLHL25Q9H0H3 589 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 ACAD8Q9UKU7 415 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 PCDHGB6Q9Y5F9 930 aa10.37□□□□□ -0.75
BEST1-201ENST00000378043 A0A1W2PPV9 198 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 CKMT1AP12532 417 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 SOX3P41225 446 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 LSM11P83369 360 aaKnown RBP eCLIP10.36□□□□□ -0.75
BEST1-201ENST00000378043 FNDC3BQ53EP0 1204 aaKnown RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 TMEM201Q5SNT2 666 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 C12orf73Q69YU5 71 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 PGBD2Q6P3X8 592 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 AMZ2Q86W34 360 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 ST13P5Q8NFI4 369 aaPredicted RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 POF1BQ8WVV4 589 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 OR8D1Q8WZ84 308 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 SMPDL3AQ92484 453 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 EXOSC8Q96B26 276 aaKnown RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 TRMT61AQ96FX7 289 aaKnown RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 ABHD8Q96I13 439 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 TREX2Q9BQ50 279 aaPredicted RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 MVB12BQ9H7P6 319 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 ZDHHC4Q9NPG8 344 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 WASH6PQ9NQA3 447 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 PEX16Q9Y5Y5 336 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 HEPACAM2A8MVW5 462 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 KMOO15229 486 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 OR10H3O60404 316 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 SCG5P05408 212 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 H1F0P07305 194 aaKnown RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 HBQ1P09105 142 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 ALOX12P18054 663 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 GJA8P48165 433 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 CAMK1Q14012 370 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 ELAVL3Q14576 367 aaKnown RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 HEPACAMQ14CZ8 416 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 SYPL1Q16563 259 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 TMEM52BQ4KMG9 183 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 DCST1Q5T197 706 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 DESI1Q6ICB0 168 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 DEF8Q6ZN54 512 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 GDPD3Q7L5L3 318 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 OLIG3Q7RTU3 272 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 OR5K2Q8NHB8 316 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 PPP1R16AQ96I34 528 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 TXNDC15Q96J42 360 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 ZNF354BQ96LW1 612 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 TRNT1Q96Q11 434 aaKnown RBP10.36□□□□□ -0.75
BEST1-201ENST00000378043 KCNS3Q9BQ31 491 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 BARHL1Q9BZE3 327 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 AICDAQ9GZX7 198 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 NEUROD4Q9HD90 331 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 TMCC3Q9ULS5 477 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 A4GNTQ9UNA3 340 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 CFL2Q9Y281 166 aa10.36□□□□□ -0.75
BEST1-201ENST00000378043 EDDM13A0A1B0GTR0 161 aa10.35□□□□□ -0.75
BEST1-201ENST00000378043 SSX4O60224 188 aa10.35□□□□□ -0.75
BEST1-201ENST00000378043 LCMT2O60294 686 aaKnown RBP10.35□□□□□ -0.75
BEST1-201ENST00000378043 CSO75390 466 aaKnown RBP10.35□□□□□ -0.75
BEST1-201ENST00000378043 DLGAP3O95886 979 aa10.35□□□□□ -0.75
BEST1-201ENST00000378043 PTTG1O95997 202 aa10.35□□□□□ -0.75
BEST1-201ENST00000378043 RPS19P39019 145 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms