RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HMSDA8MTL9 139 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TNFRSF21O75509 655 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RIN1Q13671 783 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 AADACL2Q6P093 401 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ARL9Q6T311 187 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 OVCH1Q7RTY7 1134 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 OR7G3Q8NG95 312 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PTX4Q96A99 478 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CELF6Q96J87 481 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PRKCZQ05513 592 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ULK3Q6PHR2 472 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ENPP6Q6UWR7 440 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 KLHDC8AQ8IYD2 350 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 OR8K5Q8NH50 307 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 UBASH3BQ8TF42 649 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ACSF2Q96CM8 615 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 BTBD17A6NE02 478 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PRR35P0CG20 571 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 EPORP19235 508 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SGO1Q5FBB7 561 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 OTOP3Q7RTS5 596 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LFNGQ8NES3 379 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NACC2Q96BF6 587 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ZDHHC12Q96GR4 267 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PCDH12Q9NPG4 1184 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MAP10Q9P2G4 905 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 COPS3Q9UNS2 423 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CORINQ9Y5Q5 1042 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LOC100506127A0A0U1RQW1 187 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TTC34A8MYJ7 566 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MFSD11O43934 449 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TYRP1P17643 537 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CHMP24386 653 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LBHQ53QV2 105 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RNF128Q8TEB7 428 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TNFAIP8L1Q8WVP5 186 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CNOT9Q92600 299 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MLXQ9UH92 298 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 I6L893 689 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CPSF4O95639 269 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 IDUAP35475 653 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 UAP1L1Q3KQV9 507 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TRAPPC5Q8IUR0 188 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 AMDHD1Q96NU7 426 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 KIF25Q9UIL4 384 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PLCL2Q9UPR0 1127 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 IMPA2O14732 288 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TSPAN12O95859 305 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 DUSP4Q13115 394 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RPTNQ6XPR3 784 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LYSMD3Q7Z3D4 306 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 KIAA0907Q7Z7F0 614 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SEMA6AQ9H2E6 1030 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 FAM170AA1A519 330 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 FAM25EA8MYX2 175 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 HOXD12P35452 270 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NXPE4Q6UWF7 544 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SLC38A3Q99624 504 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SPATA6Q9NWH7 488 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM212A6NML5 194 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ARPP19P56211 112 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SLC10A2Q12908 348 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CEACAM20Q6UY09 585 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 C1orf174Q8IYL3 243 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LILRB4Q8NHJ6 448 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 C1orf216Q8TAB5 229 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NRG4Q8WWG1 115 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NECAB3Q96P71 396 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RNF181Q9P0P0 153 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TRBC2A0A5B9 178 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 UPK3BL1B0FP48 263 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 UPK3BL2E5RIL1 263 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SPI1P17947 270 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MATN1P21941 496 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 MLLT1Q03111 559 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RABEPKQ7Z6M1 372 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 STPG2Q8N412 459 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 LINC01465Q8N7H1 131 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 CHDHQ8NE62 594 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 PITX2Q99697 317 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SLC25A32Q9H2D1 315 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 IL26Q9NPH9 171 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 WIF1Q9Y5W5 379 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 KANTRA0A1W2PQU2 76 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF208O43345 1280 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF234Q14588 700 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM201Q5SNT2 666 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 Q9N2J8 555 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 RGS13O14921 159 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 IL5P05113 134 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 ALPPP05187 535 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 URM1Q9BTM9 101 aaKnown RBP4.72□□□□□ -1.65
PCDH9-201ENST00000377861 C1QTNF2Q9BXJ5 285 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 SYPP08247 313 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 POU4F3Q15319 338 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 OR4C11Q6IEV9 310 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 NPNTQ6UXI9 565 aa4.72□□□□□ -1.65
PCDH9-201ENST00000377861 KDM8Q8N371 416 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms