RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ACSL3O95573 720 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 CTAGE8P0CG41 777 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 CCL3P10147 92 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 ALOX15P16050 662 aaPredicted RBP19.45■□□□□ 0.7
VSX1-201ENST00000376707 CHRNB4P30926 498 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 DNASE1L1P49184 302 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 ARFIP1P53367 373 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 HNRNPH2P55795 449 aaKnown RBP19.45■□□□□ 0.7
VSX1-201ENST00000376707 CPSF6Q16630 551 aaKnown RBP eCLIP19.45■□□□□ 0.7
VSX1-201ENST00000376707 PIGGQ5H8A4 983 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 EMC4Q5J8M3 183 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 C18orf63Q68DL7 685 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 CTAGE4Q8IX94 777 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 C9orf40Q8IXQ3 194 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 FAM109AQ8N4B1 249 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 TMEM251Q8N6I4 163 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 OR5M3Q8NGP4 307 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 FBXL20Q96IG2 436 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 SMC6Q96SB8 1091 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 LYARQ9NX58 379 aaKnown RBP19.45■□□□□ 0.7
VSX1-201ENST00000376707 CPSF2Q9P2I0 782 aaKnown RBP19.45■□□□□ 0.7
VSX1-201ENST00000376707 RNF6Q9Y252 685 aa19.45■□□□□ 0.7
VSX1-201ENST00000376707 TNPO3Q9Y5L0 923 aaKnown RBP19.45■□□□□ 0.7
VSX1-201ENST00000376707 LRRC14BA6NHZ5 514 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 H0YIV9 168 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 OR10H2O60403 315 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 PRKRAO75569 313 aaKnown RBP19.44■□□□□ 0.7
VSX1-201ENST00000376707 IGKV3-11P04433 115 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 INHBAP08476 426 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 MAGEA5P43359 124 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 PIK3CGP48736 1102 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 GTF2H2Q13888 395 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 GXYLT1Q4G148 440 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 TECRLQ5HYJ1 363 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 GTF2H2CQ6P1K8 395 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 CYP20A1Q6UW02 462 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 DGAT2L6Q6ZPD8 337 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 ACAD11Q709F0 780 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 ST13P4Q8IZP2 240 aaPredicted RBP19.44■□□□□ 0.7
VSX1-201ENST00000376707 PLD6Q8N2A8 252 aaKnown RBP19.44■□□□□ 0.7
VSX1-201ENST00000376707 RPRMLQ8N4K4 120 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 OR5M9Q8NGP3 310 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 IFT81Q8WYA0 676 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 C14orf79Q96F83 325 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 PELOQ9BRX2 385 aaKnown RBP19.44■□□□□ 0.7
VSX1-201ENST00000376707 CNPPD1Q9BV87 410 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 IPPKQ9H8X2 491 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 PNPLA3Q9NST1 481 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 LIPGQ9Y5X9 500 aa19.44■□□□□ 0.7
VSX1-201ENST00000376707 IQANK1A0A1B0GTG1 560 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 ATP6AP2A0A1C7CYW4 349 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 OR14I1A6ND48 311 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 FAM90A27PA6NNH2 459 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 KIF2AO00139 706 aaPredicted RBP19.43■□□□□ 0.7
VSX1-201ENST00000376707 HRKO00198 91 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 BCKDKO14874 412 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 PROM1O43490 865 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 ATP6AP2O75787 350 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 IGHG3P01860 377 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 NR2F6P10588 404 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 ARL1P40616 181 aaPredicted RBP19.43■□□□□ 0.7
VSX1-201ENST00000376707 SERPINB9P50453 376 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 PMPCAQ10713 525 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 CUL3Q13618 768 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 SLC29A4Q7RTT9 530 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 GOLGA7Q7Z5G4 137 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 LILRB4Q8NHJ6 448 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 DOK4Q8TEW6 326 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 PAFAH2Q99487 392 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 VPS11Q9H270 941 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 WDR41Q9HAD4 459 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 TUBA8Q9NY65 449 aaPredicted RBP19.43■□□□□ 0.7
VSX1-201ENST00000376707 ZNF180Q9UJW8 692 aa19.43■□□□□ 0.7
VSX1-201ENST00000376707 CACNA1CQ13936 2221 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 GLOD5A6NK44 160 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 FIGNL2A6NMB9 653 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 EEDO75530 441 aaKnown RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 SIX3O95343 332 aaPredicted RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 GPR75O95800 540 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 FAM58BPP0C7Q3 252 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 BSGP35613 385 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 PIGAP37287 484 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 NUP107P57740 925 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 HERVK_113P63132 956 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ERVK-8P63133 956 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 TLE4Q04727 773 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 FOXO1Q12778 655 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ZNF267Q14586 743 aaPredicted RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 HYAL4Q2M3T9 481 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 ZNF791Q3KP31 576 aaPredicted RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 SLC22A10Q63ZE4 541 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 MRM1Q6IN84 353 aaKnown RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 ZNF585AQ6P3V2 769 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 RNF111Q6ZNA4 994 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 TRILQ7L0X0 811 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 TAOK1Q7L7X3 1001 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 NUDT13Q86X67 352 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 CCDC71Q8IV32 467 aaPredicted RBP19.42■□□□□ 0.7
VSX1-201ENST00000376707 SLC15A4Q8N697 577 aa19.42■□□□□ 0.7
VSX1-201ENST00000376707 L3MBTL4Q8NA19 623 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms