RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MAGEA5P43359 124 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ALDH18A1P54886 795 aaKnown RBP13.63□□□□□ -0.23
HDAC6-204ENST00000376643 PLTPP55058 493 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 NUP107P57740 925 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 FOLH1Q04609 750 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ASPHQ12797 758 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 CUL3Q13618 768 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 DDX39BQ13838 428 aaKnown RBP13.63□□□□□ -0.23
HDAC6-204ENST00000376643 SETDB1Q15047 1291 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ACAP2Q15057 778 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF585AQ6P3V2 769 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 CYP20A1Q6UW02 462 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 C16orf47Q6ZP98 133 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-204ENST00000376643 CCDC25Q86WR0 208 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 DMRTC2Q8IXT2 367 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-204ENST00000376643 FBXW8Q8N3Y1 598 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 LIX1Q8N485 282 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 TEX9Q8N6V9 391 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 TTYH2Q9BSA4 534 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 CNPPD1Q9BV87 410 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 OR51B5Q9H339 312 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ZFP64Q9NPA5 681 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 PNPLA3Q9NST1 481 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 GRHL1Q9NZI5 618 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 TMCO1Q9UM00 188 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 CSMD1Q96PZ7 3565 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 OTOGQ6ZRI0 2925 aa13.63□□□□□ -0.23
HDAC6-204ENST00000376643 ATP6AP2A0A1C7CYW4 349 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 PINLYPA6NC86 204 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 RTCAO00442 366 aaKnown RBP13.62□□□□□ -0.23
HDAC6-204ENST00000376643 TP53I11O14683 189 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 CDH16O75309 829 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 ATP6AP2O75787 350 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 GPR75O95800 540 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 NR2F6P10588 404 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 GPX6P59796 221 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 ID2Q02363 134 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 FOXO1Q12778 655 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF791Q3KP31 576 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-204ENST00000376643 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 C1orf185Q5T7R7 199 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 HLA-DQA1Q5Y7H0 255 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 CMC1Q7Z7K0 106 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 NUDT13Q86X67 352 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 FBF1Q8TES7 1133 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 RIT1Q92963 219 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 ACKR4Q9NPB9 350 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 SNX15Q9NRS6 342 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 IGSF5Q9NSI5 407 aa13.62□□□□□ -0.23
HDAC6-204ENST00000376643 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 NKX2-6A6NCS4 301 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 G3V3Y1 287 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 FOXE1O00358 373 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 PLPP1O14494 284 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 KLK8O60259 260 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 GUCY1B2O75343 617 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 SEMA3DO95025 777 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 ZWINTO95229 277 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 FBXO45P0C2W1 286 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 CCL3P10147 92 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 CASQ1P31415 396 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 DNASE1L1P49184 302 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 SERPINB8P50452 374 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 NRG3P56975 720 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 TFF3Q07654 80 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 MYBPHQ13203 477 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 PCBP2Q15366 365 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 RIPPLY2Q5TAB7 128 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 OR52E8Q6IFG1 317 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 TAOK1Q7L7X3 1001 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 C9orf40Q8IXQ3 194 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF321PQ8N8H1 164 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 FAM13CQ8NE31 585 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 OR5M9Q8NGP3 310 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 FBXO25Q8TCJ0 367 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 TP53INP1Q96A56 240 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 DTNBP1Q96EV8 351 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF597Q96LX8 424 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 GAL3ST4Q96RP7 486 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 SECISBP2Q96T21 854 aaKnown RBP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 MTERF1Q99551 399 aaKnown RBP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 SERPINI1Q99574 410 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 TSPYL1Q9H0U9 437 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 ZNF703Q9H7S9 590 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 DDX31Q9H8H2 851 aaKnown RBP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 SH2D2AQ9NP31 389 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 TUBA8Q9NY65 449 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-204ENST00000376643 AHSPQ9NZD4 102 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 HRH3Q9Y5N1 445 aa13.61□□□□□ -0.23
HDAC6-204ENST00000376643 FBN2P35556 2912 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 F8P00451 2351 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 A0A0G2JMM0 328 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 MYOCOSA0A1B0GUC4 107 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 A0A1W2PPB8 328 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 A0A1W2PRS3 328 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 ANKRD33BA6NCL7 494 aa13.6□□□□□ -0.23
HDAC6-204ENST00000376643 HSPB2A8KAH6 182 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms