RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 DKK3Q9UBP4 350 aa14.12□□□□□ -0.15
UBQLN1-202ENST00000376395 PCDHGA3Q9Y5H0 932 aa14.12□□□□□ -0.15
UBQLN1-202ENST00000376395 N6AMT1Q9Y5N5 214 aa14.12□□□□□ -0.15
UBQLN1-202ENST00000376395 BRWD3Q6RI45 1802 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 DAPL1A0PJW8 107 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CAPN5O15484 640 aaPredicted RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 NOS1APO75052 506 aaPredicted RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CASP3P42574 277 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SLC3A1Q07837 685 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 GPR68Q15743 365 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 PARGQ86W56 976 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 DENND6BQ8NEG7 585 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 OR52N2Q8NGI0 321 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 BCL7CQ8WUZ0 217 aaPredicted RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 NARS2Q96I59 477 aaKnown RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 HRASLS5Q96KN8 279 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 NEDD4LQ96PU5 975 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CHIAQ9BZP6 476 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 TMEM138Q9NPI0 162 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 TMEM45AQ9NWC5 275 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 MBD1Q9UIS9 605 aaPredicted RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 NDRG4Q9ULP0 352 aaKnown RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CLEC2LP0C7M8 214 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 ZNF30P17039 623 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 RACK1P63244 317 aaKnown RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 NTHL1P78549 312 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SELENBP1Q13228 472 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SLC9A5Q14940 896 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 TBCEQ15813 527 aaPredicted RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 DUSP7Q16829 419 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 ZNF791Q3KP31 576 aaPredicted RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 PAQR6Q6TCH4 344 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 ZNF783Q6ZMS7 281 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 OR8H3Q8N146 312 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 TMEM145Q8NBT3 493 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CXorf40BQ96DE9 158 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 IGFLR1Q9H665 355 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 C2orf92A0A1B0GVN3 265 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 IRGMA1A4Y4 181 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 METTL15A6NJ78 407 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 OR10H2O60403 315 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SOD2P04179 222 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 RBBP4Q09028 425 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 FADDQ13158 208 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 PLAG1Q6DJT9 500 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SLC46A3Q7Z3Q1 461 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 HDDC2Q7Z4H3 204 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 RBM45Q8IUH3 476 aaKnown RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CADM2Q8N3J6 435 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SLC37A3Q8NCC5 494 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 PJA1Q8NG27 643 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 OR51G2Q8NGK0 314 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 OR8J1Q8NGP2 316 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 ZNF480Q8WV37 535 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 TDP1Q9NUW8 608 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 COQ3Q9NZJ6 369 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CNIH4Q9P003 139 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 MGAT4BQ9UQ53 548 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 KCNK6Q9Y257 313 aa14.11□□□□□ -0.15
UBQLN1-202ENST00000376395 CLDN24A6NM45 220 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 SLC31A1O15431 190 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 NUDT14O95848 222 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 IGLV3-27P01718 113 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 HMGA1P17096 107 aaKnown RBP14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 GPX2P18283 190 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 RHCEP18577 417 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 CCR8P51685 355 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 ID2Q02363 134 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 ISG20Q96AZ6 181 aaKnown RBP14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 EPYCQ99645 322 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 IFT27Q9BW83 186 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 TMEM189-UBE2V1I3L0A0 370 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 C1SP09871 688 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 IDSP22304 550 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 ARPC4P59998 168 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 PFN3P60673 137 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 LARS2Q15031 903 aaKnown RBP14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 LRRC26Q2I0M4 334 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 PAMR1Q6UXH9 720 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 PTOV1Q86YD1 416 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 Q8N402 240 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 OR4K5Q8NGD3 323 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 NELL2Q99435 816 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 TMEM175Q9BSA9 504 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 QRSL1Q9H0R6 528 aaKnown RBP14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 CEP290O15078 2479 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 SSX4O60224 188 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 KHDRBS3O75525 346 aaKnown RBP14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 CYP17A1P05093 508 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 ALPPP05187 535 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 MPC1LP0DKB6 136 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 NT5EP21589 574 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 NDUFAF6Q330K2 333 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 AGAP6Q5VW22 663 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 GDPD3Q7L5L3 318 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 RGMAQ96B86 450 aa14.1□□□□□ -0.15
UBQLN1-202ENST00000376395 AGAP4Q96P64 663 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms