RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 MFSD4BQ5TF39 518 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 REP15Q6BDI9 236 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 LCN10Q6JVE6 187 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 TIPARPQ7Z3E1 657 aaKnown RBP21.53■■□□□ 1.04
HLA-C-202ENST00000376237 NLGN4XQ8N0W4 816 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 LRRC25Q8N386 305 aaPredicted RBP21.53■■□□□ 1.04
HLA-C-202ENST00000376237 PLPP5Q8NEB5 264 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 NLGN4YQ8NFZ3 816 aaPredicted RBP21.53■■□□□ 1.04
HLA-C-202ENST00000376237 GTF2H4Q92759 462 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 CIDECQ96AQ7 238 aaPredicted RBP21.53■■□□□ 1.04
HLA-C-202ENST00000376237 ACSL6Q9UKU0 697 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 MKL2Q9ULH7 1088 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 SEC16AO15027 2179 aa21.53■■□□□ 1.04
HLA-C-202ENST00000376237 PIEZO1Q92508 2521 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 TEX51A0A1B0GUA7 166 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 ASPDHA6ND91 283 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 MRASO14807 208 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 SLC35E2P0CK97 266 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 CPMP14384 443 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 FEN1P39748 380 aaKnown RBP21.52■■□□□ 1.04
HLA-C-202ENST00000376237 BTG2P78543 158 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 NCF4Q15080 339 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 ZSCAN26Q16670 478 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 PAGE3Q5JUK9 113 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 FAM199XQ6PEV8 388 aaPredicted RBP21.52■■□□□ 1.04
HLA-C-202ENST00000376237 SLC2A7Q6PXP3 512 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 FAM198BQ6UWH4 519 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 OR4N5Q8IXE1 308 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 ROPN1LQ96C74 230 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 RCN3Q96D15 328 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 PTCHD1Q96NR3 888 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 AMDHD1Q96NU7 426 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 PANX1Q96RD7 426 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 PELOQ9BRX2 385 aaKnown RBP21.52■■□□□ 1.04
HLA-C-202ENST00000376237 NEUROD4Q9HD90 331 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 ASCL3Q9NQ33 180 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 THSD1Q9NS62 852 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 PTPRBP23467 1997 aa21.52■■□□□ 1.04
HLA-C-202ENST00000376237 RFXANKO14593 260 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 AIM2O14862 343 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 ERN1O75460 977 aaKnown RBP21.51■■□□□ 1.03
HLA-C-202ENST00000376237 UNC5CO95185 931 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 RAB40ALP0C0E4 278 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 C8orf89P0DMQ9 161 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 RASSF2P50749 326 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 NCBP2P52298 156 aaKnown RBP eCLIP21.51■■□□□ 1.03
HLA-C-202ENST00000376237 RHAGQ02094 409 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 C6orf10Q5SRN2 563 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 FAM180BQ6P0A1 224 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 RETREG3Q86VR2 466 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 ANKRD46Q86W74 232 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 CCDC116Q8IYX3 515 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 ST13P4Q8IZP2 240 aaPredicted RBP21.51■■□□□ 1.03
HLA-C-202ENST00000376237 SPSB2Q99619 263 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 NPAS2Q99743 824 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 ALOXE3Q9BYJ1 711 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 GLIPR2Q9H4G4 154 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 SERHLQ9NQF3 203 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 GID8Q9NWU2 228 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 TAS2R9Q9NYW1 312 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 MAP10Q9P2G4 905 aa21.51■■□□□ 1.03
HLA-C-202ENST00000376237 KCNH1O95259 989 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 ATP1B1P05026 303 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 FOXC1Q12948 553 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 ART3Q13508 389 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 CPZQ66K79 652 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 HACD2Q6Y1H2 254 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 GOT1L1Q8NHS2 421 aaPredicted RBP21.5■■□□□ 1.03
HLA-C-202ENST00000376237 SUN3Q8TAQ9 357 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 NXPE2Q96DL1 559 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 RBM18Q96H35 190 aaKnown RBP21.5■■□□□ 1.03
HLA-C-202ENST00000376237 VN1R1Q9GZP7 353 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 SLAMF7Q9NQ25 335 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 NDE1Q9NXR1 346 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 PADI2Q9Y2J8 665 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 CLDN16Q9Y5I7 305 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 A0A096LPI6 279 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 IGKV3D-11A0A0A0MRZ8 115 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 C21orf140B9A014 251 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 RAD1O60671 282 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 SLITRK5O94991 958 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 C6orf47O95873 294 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 RECKO95980 971 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 HEXBP07686 556 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 KRT16P08779 473 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 TCN2P20062 427 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 MAOAP21397 527 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 GALNSP34059 522 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 CPA2P48052 419 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 PLIN5Q00G26 463 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 NFYCQ13952 458 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 YTHDF3Q7Z739 585 aaKnown RBP21.5■■□□□ 1.03
HLA-C-202ENST00000376237 LAPTM4BQ86VI4 370 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 PRSS58Q8IYP2 241 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 CLECL1Q8IZS7 167 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 TRIML2Q8N7C3 387 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 PSMA8Q8TAA3 256 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 NECTIN3Q9NQS3 549 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 AK5Q9Y6K8 562 aa21.5■■□□□ 1.03
HLA-C-202ENST00000376237 IDSB3KWA1 339 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms