RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 HAPLN1P10915 354 aaPredicted RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ZNF84P51523 738 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 SERINC3Q13530 473 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ASPGQ86U10 573 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 PEX11GQ96HA9 241 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 LMF1Q96S06 567 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 RANBP3Q9H6Z4 567 aaPredicted RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 LRRC42Q9Y546 428 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 TRBV2A0A0J9YWF9 115 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 DLGAP1O14490 977 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ADAP00813 363 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 PRSS56P0CW18 603 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 S100A12P80511 92 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ABHD18Q0P651 414 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 SQSTM1Q13501 440 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 GNMTQ14749 295 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 OR56A3Q8NH54 315 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 FAM46AQ96IP4 442 aaKnown RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 NEDD4LQ96PU5 975 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 AFDNP55196 1824 aaKnown RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 INMT-MINDY4F8WBC2 141 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 FBP2O00757 339 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 SLITRK5O94991 958 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ADH1BP00325 375 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 MAP4K2Q12851 820 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 ISOC1Q96CN7 298 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 DPCDQ9BVM2 203 aaPredicted RBP13.14□□□□□ -0.31
COL4A1-201ENST00000375820 TPSD1Q9BZJ3 242 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 PREBQ9HCU5 417 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 AGAP5A6NIR3 686 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 KRBOX4Q5JUW0 171 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 SGCZQ96LD1 299 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
COL4A1-201ENST00000375820 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 IFNGR1P15260 489 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 TBPL1P62380 186 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ZNF773Q6PK81 442 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 OR52E2Q8NGJ4 325 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 TMEM246Q9BRR3 403 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 MROQ9BYG7 248 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 K7ERQ8 282 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 FMO6PO60774 539 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 PYCR1P32322 319 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 OR4D2P58180 307 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 PITX1P78337 314 aaPredicted RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 GALNT6Q8NCL4 622 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 MAL2Q969L2 176 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 PHOX2BQ99453 314 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 MGAT4BQ9UQ53 548 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ATE1O95260 518 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 STSP08842 583 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 SLC2A5P22732 501 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 SNRPD2P62316 118 aaKnown RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 RPS26P11Q5JNZ5 115 aaPredicted RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 C16orf58Q96GQ5 468 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 FANCFQ9NPI8 374 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 A6NL46 340 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 RBBP9O75884 186 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ARSFP54793 590 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 GALNT2Q10471 571 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 PAFAH1B3Q15102 231 aaKnown RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 FAM205BPQ63HN1 556 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ZER1Q7Z7L7 766 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 Q8N402 240 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 IGSF8Q969P0 613 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 TMEM175Q9BSA9 504 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 SYT4Q9H2B2 425 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 KCMF1Q9P0J7 381 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 FETUBQ9UGM5 382 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 RPH3AQ9Y2J0 694 aaPredicted RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 WDR45BQ5MNZ6 344 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 TUBA3EQ6PEY2 450 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 SHQ1Q6PI26 577 aaKnown RBP13.13□□□□□ -0.31
COL4A1-201ENST00000375820 TREML1Q86YW5 311 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 OR2T33Q8NG76 320 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ETV5P41161 510 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 CDKN2DP55273 166 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ENPP6Q6UWR7 440 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 ZSWIM9Q86XI8 627 aa13.13□□□□□ -0.31
COL4A1-201ENST00000375820 MAB21L2Q9Y586 359 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms