RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RASGRP3Q8IV61 690 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 NANOGP1Q8N7R0 232 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SORBS1Q9BX66 1292 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 TSSK6Q9BXA6 273 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SLC22A4Q9H015 551 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 DSPPQ9NZW4 1301 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 HEPACAM2A8MVW5 462 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 OR10H3O60404 316 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 KLK1P06870 262 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ADH1AP07327 375 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 MSL3P1P0C860 447 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 OSMP13725 252 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 MYL9P24844 172 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 PBLDP30039 288 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 KIR2DL3P43628 341 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ALDH9A1P49189 494 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 KCNC3Q14003 757 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF630Q2M218 657 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 SYTL3Q4VX76 610 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 MED27Q6P2C8 311 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 LYPD8Q6UX82 237 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CAMKK1Q8N5S9 505 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 SIMC1Q8NDZ2 872 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 C16orf78Q8WTQ4 265 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 WDFY2Q96P53 400 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 NDUFB11Q9NX14 153 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 SNX7Q9UNH6 387 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 A0A1W2PRB8 838 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 NPC1O15118 1278 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ALX3O95076 343 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 IFNA14P01570 189 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ARAFP10398 606 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CHRNB1P11230 501 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 TNNI3P19429 210 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ENDOUP21128 410 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 GABRR2P28476 465 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 ETV3P41162 512 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CAV3P56539 151 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 SNRPGP62308 76 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 NCF4Q15080 339 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 TNFAIP8L2Q6P589 184 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CEACAM20Q6UY09 585 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CCDC149Q6ZUS6 474 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CMTM8Q8IZV2 173 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CADM2Q8N3J6 435 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CREB3L4Q8TEY5 395 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 METTL2AQ96IZ6 378 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 MND1Q9BWT6 205 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 FAM83DQ9H4H8 585 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 TVP23BQ9NYZ1 205 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 PLEKHB1Q9UF11 243 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 CARD8Q9Y2G2 431 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 DNMT3AQ9Y6K1 912 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 MYOFQ9NZM1 2061 aa13.42□□□□□ -0.26
CLCNKA-202ENST00000375692 SLC35F4A4IF30 521 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 TNFRSF10AO00220 468 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 PLA2G10O15496 165 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 EPCAMP16422 314 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 ITGB7P26010 798 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 CCR2P41597 374 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 RPS5P46782 204 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 XKP51811 444 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 ASAH1Q13510 395 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 YIF1BQ5BJH7 314 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 PDZK1Q5T2W1 519 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 CASP12Q6UXS9 341 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 USP30Q70CQ3 517 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 GPR32P1Q8NGA4 272 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SLC25A46Q96AG3 418 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 TRMT2BQ96GJ1 504 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SMG9Q9H0W8 520 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 MTIF3Q9H2K0 278 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SPNS1Q9H2V7 528 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 RPRD1BQ9NQG5 326 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 CFAP97Q9P2B7 532 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 ENOPH1Q9UHY7 261 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 TMCC3Q9ULS5 477 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 ANGPT4Q9Y264 503 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 PPIL1Q9Y3C6 166 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 IRAK3Q9Y616 596 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 IQCMA0A1B0GVH7 501 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 A0A1W2PRU2 124 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 TLX2O43763 284 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 BCHEP06276 602 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 TSPAN19P0C672 248 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SDC2P34741 201 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 GPC1P35052 558 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 DSTNP60981 165 aa13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 LSM11P83369 360 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 ELOAQ14241 798 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SLBPQ14493 270 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.41□□□□□ -0.26
CLCNKA-202ENST00000375692 SLC35F1Q5T1Q4 408 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms