RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 C9orf40Q8IXQ3 194 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 ZNF295-AS1Q8N0V1 137 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 MARVELD2Q8N4S9 558 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 NUBPLQ8TB37 319 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 SLC44A1Q8WWI5 657 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 ATP6V1E2Q96A05 226 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 C16orf45Q96MC5 204 aaPredicted RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 FAM173AQ9BQD7 235 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 FUT8Q9BYC5 575 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 DDX31Q9H8H2 851 aaKnown RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 SACM1LQ9NTJ5 587 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 COQ3Q9NZJ6 369 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 MTRF1LQ9UGC7 380 aaKnown RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 DMGDHQ9UI17 866 aaKnown RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 OTOGQ6ZRI0 2925 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 PDZD2O15018 2839 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 A0A0A6YYD5 115 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 A0A1W2PR48 441 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 NPIPA2E9PIF3 369 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 NPIPA3F8WFD2 350 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 FOXE1O00358 373 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 OR7A17O14581 309 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 TMPRSS11DO60235 418 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 GLSO94925 669 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 P04436 131 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 FAM58BPP0C7Q3 252 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 CCL3P10147 92 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 ALOX15P16050 662 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 PLIN5Q00G26 463 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 EMC4Q5J8M3 183 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 NDUFAF5Q5TEU4 345 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 CYP20A1Q6UW02 462 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 GK5Q6ZS86 529 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 ST13P4Q8IZP2 240 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 PTGR2Q8N8N7 351 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 OR52B6Q8NGF0 335 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 FBXL20Q96IG2 436 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 ART5Q96L15 291 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 CNPPD1Q9BV87 410 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 TRIM8Q9BZR9 551 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
NELFE-201ENST00000375425 TP63Q9H3D4 680 aaPredicted RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 CDC42EP4Q9H3Q1 356 aaKnown RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 LYARQ9NX58 379 aaKnown RBP13.15□□□□□ -0.3
NELFE-201ENST00000375425 PGRMC2O15173 223 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 OR10H2O60403 315 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 GBAP04062 536 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 INHBAP08476 426 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 RBP1P09455 135 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 PIGAP37287 484 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
NELFE-201ENST00000375425 DNASE1L1P49184 302 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 CCNG1P51959 295 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 HERVK_113P63132 956 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 ERVK-8P63133 956 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 FOXO1Q12778 655 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 ZNF791Q3KP31 576 aaPredicted RBP13.14□□□□□ -0.31
NELFE-201ENST00000375425 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 SLC22A10Q63ZE4 541 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 MMGT1Q8N4V1 131 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 TMEM251Q8N6I4 163 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 RIT1Q92963 219 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 UCN3Q969E3 161 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 ERVK-6Q9BXR3 956 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 IL1RL2Q9HB29 575 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 SEMA4BQ9NPR2 832 aaPredicted RBP13.14□□□□□ -0.31
NELFE-201ENST00000375425 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.31
NELFE-201ENST00000375425 ERVK-19Q9WJR5 959 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
NELFE-201ENST00000375425 NADKO95544 446 aaPredicted RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 IGHG3P01860 377 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 NR2F6P10588 404 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 MAGEA5P43359 124 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 MAGEA12P43365 314 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 PMPCAQ10713 525 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 FAM109AQ8N4B1 249 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 RPRMLQ8N4K4 120 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SLC15A4Q8N697 577 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 NOA1Q8NC60 698 aaKnown RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 OR5M9Q8NGP3 310 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 RND1Q92730 232 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 ISL2Q96A47 359 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 NSUN5Q96P11 429 aaKnown RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 PAFAH2Q99487 392 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SERPINI1Q99574 410 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 SPOCK3Q9BQ16 436 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 PELOQ9BRX2 385 aaKnown RBP13.13□□□□□ -0.31
NELFE-201ENST00000375425 NTMT1Q9BV86 223 aa13.13□□□□□ -0.31
NELFE-201ENST00000375425 WDR41Q9HAD4 459 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms