RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 C5orf58C9J3I9 102 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ADAMDEC1O15204 470 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PDE9AO76083 593 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BMP10O95393 424 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CSF2P04141 144 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 WNT1P04628 370 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 NR2F6P10588 404 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 NME1P15531 152 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ITGA2P17301 1181 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CSNK2A2P19784 350 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 IGFBP5P24593 272 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LSSP48449 732 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RPS26P62854 115 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 HHEXQ03014 270 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 IL18R1Q13478 541 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TP53BP2Q13625 1128 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MANEAQ5SRI9 462 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BHLHB9Q6PI77 547 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SATL1Q86VE3 508 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SFTPA2Q8IWL1 248 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 AVL9Q8NBF6 648 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KLHL6Q8WZ60 621 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TMEM19Q96HH6 336 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BARD1Q99728 777 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 A0A087WXM4 84 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ERAL1O75616 437 aaKnown RBP17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF10P21506 573 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CD38P28907 300 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PIGAP37287 484 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TNFRSF17Q02223 184 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 C1orf61Q13536 156 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MAPK11Q15759 364 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FAHD1Q6P587 224 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ABHD13Q7L211 337 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 THAP5Q7Z6K1 395 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CYP4Z1Q86W10 505 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 C8orf59Q8N0T1 100 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 C10orf90Q96M02 699 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF681Q96N22 645 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF300Q96RE9 604 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GRIP2Q9C0E4 1043 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZCCHC3Q9NUD5 404 aaKnown RBP17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FBXL21Q9UKT6 434 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 POMT2Q9UKY4 750 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PSME2Q9UL46 239 aa17■□□□□ 0.31
HLA-DQB1-201ENST00000374943 EME2A4GXA9 379 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 WASHC1A8K0Z3 465 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZSCAN9O15535 394 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 JRKO75564 520 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DNAJB5O75953 348 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BCHEP06276 602 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BUD31P41223 144 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ALDH3B2P48448 385 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KHKP50053 298 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ANXA11P50995 505 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DAPP51397 102 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RPS6KA3P51812 740 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RACK1P63244 317 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DUSP2Q05923 314 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SIM2Q14190 667 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ELOCQ15369 112 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 NADK2Q4G0N4 442 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SPEM1Q8N4L4 309 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZNF655Q8N720 491 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PIK3C3Q8NEB9 887 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FAM46DQ8NEK8 389 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OR56A1Q8NGH5 318 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MIPOL1Q8TD10 442 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ADAMTS16Q8TE57 1224 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RERGQ96A58 199 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RUBCNLQ9H714 662 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 UCK1Q9HA47 277 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PDP1Q9P0J1 537 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KCMF1Q9P0J7 381 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 P2RX2Q9UBL9 471 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RAB23Q9ULC3 237 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 THADAQ6YHU6 1953 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KNL1Q8NG31 2342 aa16.99■□□□□ 0.31
HLA-DQB1-201ENST00000374943 LOC100130705A0A1B0GUX0 176 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TMEM247A6NEH6 219 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRAMEF25A6NGN4 478 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 H0YGG7 62 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 B3GALT2O43825 422 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SH3BP5O60239 455 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRAMEF10O60809 474 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SEC24DO94855 1032 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FHP07954 510 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CDH2P19022 906 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CD247P20963 164 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 RRM2P31350 389 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MPIP34949 423 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ARF3P61204 181 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FRMPD2BQ6IN97 320 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 BORAQ6PGQ7 559 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SAMD14Q8IZD0 417 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 CAMKK1Q8N5S9 505 aa16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 APOBEC4Q8WW27 367 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OR51I1Q9H343 314 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms