RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ETAA1Q9NY74 926 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TSC22D4Q9Y3Q8 395 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 PLEKHM1Q9Y4G2 1056 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TNFRSF10CO14798 259 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 PCDHGA12O60330 932 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TNFRSF21O75509 655 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 GCM2O75603 506 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 RASGRP1O95267 797 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 RPN2P04844 631 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 IL3P08700 152 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 ZNF883P0CG24 379 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 CTSEP14091 401 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 RRM2P31350 389 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 LIMK1P53667 647 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 RBBP4Q09028 425 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 FADDQ13158 208 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 SCARB2Q14108 478 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 IKBIPQ70UQ0 350 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 B3GNT8Q7Z7M8 397 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 LRRTM4Q86VH4 590 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TSPYL5Q86VY4 417 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 CCL4L1Q8NHW4 92 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 LZICQ8WZA0 190 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 LRRC61Q9BV99 259 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TMEM168Q9H0V1 697 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 GPN2Q9H9Y4 310 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TAS2R9Q9NYW1 312 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 AHSPQ9NZD4 102 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 ACSL6Q9UKU0 697 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 CDV3Q9UKY7 258 aaKnown RBP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 PSME2Q9UL46 239 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 NDRG4Q9ULP0 352 aaKnown RBP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 GPSM3Q9Y4H4 160 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 MAP4K5Q9Y4K4 846 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 A0A1W2PRB8 838 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 KLHL18O94889 574 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 BCL10O95999 233 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 OPN1SWP03999 348 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 ZNF182P17025 639 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-202ENST00000374876 CD247P20963 164 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 SOAT1P35610 550 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 BLKP51451 505 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 CXCR4P61073 352 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 SUZ12Q15022 739 aaKnown RBP14.74□□□□□ -0.05
CCDC40-202ENST00000374876 MPEG1Q2M385 716 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 DBX2Q6ZNG2 339 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 KANSL1Q7Z3B3 1105 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 VN1R5Q7Z5H4 357 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 C17orf64Q86WR6 236 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 ZC3H7AQ8IWR0 971 aaKnown RBP14.74□□□□□ -0.05
CCDC40-202ENST00000374876 EID2Q8N6I1 236 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 OR5AK3PQ8NH89 298 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 NFKBIDQ8NI38 313 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 RAD21L1Q9H4I0 556 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 SLC23A2Q9UGH3 650 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 DGKBQ9Y6T7 804 aa14.74□□□□□ -0.05
CCDC40-202ENST00000374876 LRP4O75096 1905 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ZNF99A8MXY4 864 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TM4SF5O14894 197 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ADAMDEC1O15204 470 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 AQP9O43315 295 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 PCMT1P22061 227 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 NPRL3Q12980 569 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 IFI44LQ53G44 452 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 SLC9B2Q86UD5 537 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 FAM129CQ86XR2 697 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 RNF130Q86XS8 419 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 OR5K2Q8NHB8 316 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TBC1D15Q8TC07 691 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 RHBDD1Q8TEB9 315 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ZNF347Q96SE7 839 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 FUNDC2Q9BWH2 189 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 SORBS1Q9BX66 1292 aaKnown RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TMEM38AQ9H6F2 299 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 NDUFAF4Q9P032 175 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 AASSQ9UDR5 926 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TAC3Q9UHF0 121 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TESMINQ9Y4I5 508 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 CFAP20Q9Y6A4 193 aaKnown RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ANKDD1BA6NHY2 528 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TMEM229AB2RXF0 380 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 TNFRSF11BO00300 401 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 SLC30A4O14863 429 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 YKT6O15498 198 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 INMTO95050 263 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 KRT75O95678 551 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 GIMD1P0DJR0 217 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 EPHA2P29317 976 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 RPP38P78345 283 aaKnown RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 EMX1Q04741 257 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ELOAQ14241 798 aaKnown RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ARHGAP19Q14CB8 494 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 MAD2L1BPQ15013 274 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-202ENST00000374876 NPTX1Q15818 432 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 SLC5A12Q1EHB4 618 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 DEFB133Q30KQ1 61 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 AIF1LQ9BQI0 150 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 SLC6A16Q9GZN6 736 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 C1GALT1Q9NS00 363 aa14.73□□□□□ -0.05
CCDC40-202ENST00000374876 ERVK-18Q9QC07 812 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms