RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MYF6P23409 242 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 PRPH2P23942 346 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 FASP25445 335 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 IL12AP29459 219 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 HMOX2P30519 316 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CD70P32970 193 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CA5AP35218 305 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 GGT5P36269 586 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 HNRNPFP52597 415 aaKnown RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 NR1H2P55055 460 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 PSG6Q00889 435 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TLE2Q04725 743 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CAPRIN1Q14444 709 aaKnown RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 KIAA0040Q15053 153 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CHRNA6Q15825 494 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ATP6AP1Q15904 470 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NRF1Q16656 503 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 AP5B1Q2VPB7 878 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 LRRK1Q38SD2 2015 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TRIM60Q495X7 471 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 GGTA1PQ4G0N0 100 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NADK2Q4G0N4 442 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 KCTD21Q4G0X4 260 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 FBXO48Q5FWF7 155 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NHSL2Q5HYW2 709 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TMTC4Q5T4D3 741 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TXNDC8Q6A555 127 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NANOGP8Q6NSW7 305 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 C22orf39Q6P5X5 142 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CYP20A1Q6UW02 462 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 IL27RAQ6UWB1 636 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 DLEU7Q6UYE1 221 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ZBTB49Q6ZSB9 765 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TPRG1Q6ZUI0 275 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 LRRC70Q7Z2Q7 622 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SATL1Q86VE3 508 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 EPHX4Q8IUS5 362 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 BBS7Q8IWZ6 715 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 KIAA2013Q8IYS2 634 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TBC1D21Q8IYX1 336 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 FAM9CQ8IZT9 166 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TCAIMQ8N3R3 496 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 AADATQ8N5Z0 425 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ZNF557Q8N988 423 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 TNIP2Q8NFZ5 429 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 OR4F6Q8NGB9 312 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 OR8J3Q8NGG0 315 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 OR52E4Q8NGH9 312 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 HM13Q8TCT9 377 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ESAMQ96AP7 390 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 VPS33AQ96AX1 596 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TBC1D20Q96BZ9 403 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 RHBDF1Q96CC6 855 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CENPNQ96H22 339 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 TEX37Q96LM6 180 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CNBD2Q96M20 576 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ZNF641Q96N77 438 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 ACOX2Q99424 681 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SLC29A1Q99808 456 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 HAUS8Q9BT25 410 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 C1orf50Q9BV19 199 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NTMT1Q9BV86 223 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SEMA6AQ9H2E6 1030 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NANOGQ9H9S0 305 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 IL1RL2Q9HB29 575 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SMOXQ9NWM0 555 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ELOVL2Q9NXB9 296 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 WWOXQ9NZC7 414 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 PTTG2Q9NZH5 202 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NFKBIL1Q9UBC1 381 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 OPTCQ9UBM4 332 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ZNF639Q9UID6 485 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ANAPC2Q9UJX6 822 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 INTS6Q9UL03 887 aaKnown RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 KIF26AQ9ULI4 1882 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 USP22Q9UPT9 525 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 EIF3LQ9Y262 564 aaKnown RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 AP3M1Q9Y2T2 418 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 RNF11Q9Y3C5 154 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 NEUROG3Q9Y4Z2 214 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 POLR3HQ9Y535 204 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 TRIM17Q9Y577 477 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 PRSS21Q9Y6M0 314 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 MUC22E2RYF6 1773 aaPredicted RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 TRBV5-3A0A0A0MS03 114 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 A0A0U1RQS6 177 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ARHGAP10A1A4S6 786 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 TSPAN11A1L157 253 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 NPIPB15A6NHN6 443 aaPredicted RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 SAC3D1A6NKF1 404 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KRTAP29-1A8MX34 341 aaPredicted RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 WASH3PC4AMC7 463 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 H3BNH8 94 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 MANBAO00462 879 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 DLGAP1O14490 977 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SOCS2O14508 198 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KPNA5O15131 536 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ACOX3O15254 700 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 INPP4BO15327 924 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SLC16A5O15375 505 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms