RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ALDH9A1P49189 494 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 XKP51811 444 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 AP2B1P63010 937 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 RHDQ02161 417 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 ID2Q02363 134 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 AIMP2Q13155 320 aaKnown RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 CEBPEQ15744 281 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 TBR1Q16650 682 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 COL28A1Q2UY09 1125 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 BORAQ6PGQ7 559 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 PAPD4Q6PIY7 484 aaKnown RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 SPATA19Q7Z5L4 167 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 SAMD14Q8IZD0 417 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 MMP21Q8N119 569 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 LIX1Q8N485 282 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 NFAM1Q8NET5 270 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 M1APQ8TC57 530 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 RBM18Q96H35 190 aaKnown RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 CRELD1Q96HD1 420 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF681Q96N22 645 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 TSSK3Q96PN8 268 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 CCDC28BQ9BUN5 200 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 ING2Q9H160 280 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 REEP4Q9H6H4 257 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 PNO1Q9NRX1 252 aaKnown RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 UTS2RQ9UKP6 389 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 MAPRE3Q9UPY8 281 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 GOLGA8QA0A0J9YX86 632 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 GOLGA8OA6NCC3 632 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 A8MUA0 341 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 GOLGA8NF8WBI6 632 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 ERAL1O75616 437 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 SEC24DO94855 1032 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 IFNA16P05015 189 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 SERPINA7P05543 415 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 VIMP08670 466 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 G6PDP11413 515 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 CPMP14384 443 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 COX7A2P14406 83 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 DDX5P17844 614 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 PRPS1L1P21108 318 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 RPL3P39023 403 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 IDH3AP50213 366 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 GPR143P51810 404 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 AQP5P55064 265 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 DIO3P55073 304 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 CLDN8P56748 225 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 C21orf58P58505 322 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 SLC26A5P58743 744 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 PLIN5Q00G26 463 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 Q0VFX4 171 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 PDE7AQ13946 482 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 PTGR1Q14914 329 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 EXT1Q16394 746 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 LSM12Q3MHD2 195 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 PLAG1Q6DJT9 500 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 RIPOR1Q6ZS17 1223 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 ACAD11Q709F0 780 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 R3HCC1LQ7Z5L2 792 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 TICAM1Q8IUC6 712 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 RIMKLAQ8IXN7 391 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 KBTBD2Q8IY47 623 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 CLEC1AQ8NC01 280 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 MORN4Q8NDC4 146 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 OR14A16Q8NHC5 309 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 CDC26Q8NHZ8 85 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 PTPMT1Q8WUK0 201 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 DAZLQ92904 295 aaKnown RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 KLHL29Q96CT2 875 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 CNRIP1Q96F85 164 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 DGAT2Q96PD7 388 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF317Q96PQ6 595 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-202ENST00000374676 OR52B2Q96RD2 323 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 TRIM55Q9BYV6 548 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF160Q9HCG1 818 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 MMP25Q9NPA2 562 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 MIEF1Q9NQG6 463 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 GIMAP4Q9NUV9 329 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 AIG1Q9NVV5 245 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 C5AR2Q9P296 337 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 ATP6V1HQ9UI12 483 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 CLCA3PQ9Y6N3 262 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF780BQ9Y6R6 833 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 FAM208BQ5VWN6 2430 aa10.62□□□□□ -0.71
HSPG2-202ENST00000374676 MYOCOSA0A1B0GUC4 107 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 GABRR3A8MPY1 467 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 MYO1GB0I1T2 1018 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 C17orf105B2RV13 164 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 POLR3GO15318 223 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-202ENST00000374676 DYRK3O43781 588 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 KLHL41O60662 606 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 DIAPH2O60879 1101 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 CEACAM4O75871 244 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 DDAH2O95865 285 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 ATP1B1P05026 303 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 ALDOCP09972 364 aaKnown RBP10.61□□□□□ -0.71
HSPG2-202ENST00000374676 TNNI3P19429 210 aa10.61□□□□□ -0.71
HSPG2-202ENST00000374676 FEN1P39748 380 aaKnown RBP10.61□□□□□ -0.71
HSPG2-202ENST00000374676 PRSS53Q2L4Q9 553 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms