RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SLC43A2Q8N370 569 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ACOT4Q8N9L9 421 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 OR10G2Q8NGC3 310 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 OR4C15Q8NGM1 316 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 GPBAR1Q8TDU6 330 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 EZH1Q92800 747 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TANKQ92844 425 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TM4SF19Q96DZ7 209 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 OTUB1Q96FW1 271 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 MPP4Q96JB8 637 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC35G5Q96KT7 338 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF578Q96N58 590 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 IL17FQ96PD4 163 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TRNT1Q96Q11 434 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 DPH7Q9BTV6 452 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 PINK1Q9BXM7 581 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 DGCR6LQ9BY27 220 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 CXorf36Q9H7Y0 433 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SMURF2Q9HAU4 748 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 NDOR1Q9UHB4 597 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 RAPGEFL1Q9UHV5 662 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 UTS2RQ9UKP6 389 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ABCG2Q9UNQ0 655 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ERVK-11Q9UQG0 969 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ASB4Q9Y574 426 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC22A7Q9Y694 548 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 A3GALT2U3KPV4 340 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 V9GYQ6 96 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TRPM6Q9BX84 2022 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 A0A1W2PPC1 479 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 HYKKA2RU49 373 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 A6NCN8 305 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 EIF4E1BA6NMX2 242 aaKnown RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF99A8MXY4 864 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 ISM1B1AKI9 464 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 PROM1O43490 865 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 B3GALT2O43825 422 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SRPX2O60687 465 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SEMA4FO95754 770 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 TBX6O95947 436 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 VIPP01282 170 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SMIM10L1P0DMW3 83 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MATN1P21941 496 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SOAT1P35610 550 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 TPMTP51580 245 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 RPP38P78345 283 aaKnown RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 CCINQ13939 588 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 RAB39AQ14964 217 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MAD2L1BPQ15013 274 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MOGQ16653 247 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MPEG1Q2M385 716 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 DCST1Q5T197 706 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 GTF2IRD2BQ6EKJ0 949 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 USP53Q70EK8 1073 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SYT13Q7L8C5 426 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 GTF2IRD2Q86UP8 949 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 TRIM48Q8IWZ4 208 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 ADGRF3Q8IZF5 1079 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 OFCC1Q8IZS5 231 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 TAGAPQ8N103 731 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 C10orf111Q8N326 155 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 TMEM145Q8NBT3 493 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF740Q8NDX6 193 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 RHOXF1Q8NHV9 184 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 NFKBIDQ8NI38 313 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC38A5Q8WUX1 472 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 S100ZQ8WXG8 99 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MUL1Q969V5 352 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 RERGQ96A58 199 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 TAMM41Q96BW9 452 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 NMD3Q96D46 503 aaKnown RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SMIM10Q96HG1 83 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 IER2Q9BTL4 223 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 ACAT2Q9BWD1 397 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MTHFD2LQ9H903 347 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 CERS4Q9HA82 394 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 PLGRKTQ9HBL7 147 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 LHX9Q9NQ69 397 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 GPR27Q9NS67 375 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 CLDND1Q9NY35 253 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SEC14L3Q9UDX4 400 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SERGEFQ9UGK8 458 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC13A4Q9UKG4 626 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF232Q9UNY5 417 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SATB2Q9UPW6 733 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 SH2B3Q9UQQ2 575 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 WDR37Q9Y2I8 494 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 PCDHGB5Q9Y5G0 923 aa8.25□□□□□ -1.09
SNRNP40-202ENST00000373720 IGKV1-8A0A0C4DH67 115 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 CLCA1A8K7I4 914 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 hCG_2039718K7EN88 272 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 HMGN4O00479 90 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 LINC01565O15544 149 aa8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 ERI3O43414 337 aaKnown RBP8.24□□□□□ -1.09
SNRNP40-202ENST00000373720 NDUFS2O75306 463 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms