RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CYP8B1Q9UNU6 501 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 NR2E3Q9Y5X4 410 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 A0A088AWK7 358 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 SMLR1H3BR10 107 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 BMP4P12644 408 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 PBLDP30039 288 aaPredicted RBP6.33□□□□□ -1.4
CHD6-203ENST00000373233 DNASE1L1P49184 302 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 HNRNPDQ14103 355 aaKnown RBP6.33□□□□□ -1.4
CHD6-203ENST00000373233 XKR4Q5GH76 650 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 ATP6V1C2Q8NEY4 427 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 OR8D1Q8WZ84 308 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 PSMG2Q969U7 264 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 OXSMQ9NWU1 459 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 TRPM6Q9BX84 2022 aa6.33□□□□□ -1.4
CHD6-203ENST00000373233 LOC100130705A0A1B0GUX0 176 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 AGPAT2O15120 278 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 LATS1O95835 1130 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SNRNP70P08621 437 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 POU2F1P14859 743 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 MAOAP21397 527 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 DNAJA1P31689 397 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 KCNQ1P51787 676 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 HMGN3Q15651 99 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ADAMTSL2Q86TH1 951 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ARHGAP12Q8IWW6 846 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ZNF454Q8N9F8 522 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TXNDC5Q8NBS9 432 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 TWIST2Q8WVJ9 160 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 LGALS12Q96DT0 336 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 LGR4Q9BXB1 951 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TXLNGYQ9BZA5 131 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GAREM1Q9H706 876 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 MAT2AP31153 395 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 LBX1P52954 281 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 P2RX3P56373 397 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ADGRF1Q5T601 910 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TTLL10Q6ZVT0 673 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TRAPPC5Q8IUR0 188 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 CPNE9Q8IYJ1 553 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 BOLLQ8N9W6 283 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 FAM46DQ8NEK8 389 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 CORO2AQ92828 525 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SMCO4Q9NRQ5 59 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 GSKIPQ9P0R6 139 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SCP2D1Q9UJQ7 156 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SOCS2O14508 198 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 BUD23O43709 281 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 ALDOBP05062 364 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 LPOP22079 712 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 NMBRP28336 390 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 MTPNP58546 118 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 RAB41Q5JT25 222 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 CLEC6AQ6EIG7 209 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 FSTL4Q6MZW2 842 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 FBXO46Q6PJ61 603 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 WASH2PQ6VEQ5 465 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ARL14EPQ8N8R7 260 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 OR2L8Q8NGY9 312 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 PIGXQ8TBF5 258 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 HSH2DQ96JZ2 352 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SAMD10Q9BYL1 202 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 NKX6-2Q9C056 277 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 TLR9Q9NR96 1032 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ANKUB1A6NFN9 424 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TGOLN2O43493 480 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 SDC3O75056 442 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 KCNC1P48547 511 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TTPAP49638 278 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 PKDCCQ504Y2 493 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ARL13AQ5H913 290 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 SLC22A10Q63ZE4 541 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 DTX3Q8N9I9 347 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 CHST4Q8NCG5 386 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 FBRSQ9HAH7 460 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 TEX10Q9NXF1 929 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 MS4A12Q9NXJ0 267 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 AHSPQ9NZD4 102 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ZNF282Q9UDV7 671 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 INSL5Q9Y5Q6 135 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 AP1M2Q9Y6Q5 423 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ARHGEF17Q96PE2 2063 aaPredicted RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 SLC1A7O00341 560 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 DNAJB1P25685 340 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 CCR4P51679 360 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 ARSFP54793 590 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 BIDP55957 195 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 RTP2Q5QGT7 225 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 CNOT9Q92600 299 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 XKP51811 444 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 RPS24P62847 133 aaKnown RBP6.32□□□□□ -1.4
CHD6-203ENST00000373233 TRAM2Q15035 370 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD6-203ENST00000373233 ZNF675Q8TD23 568 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 KXD1Q9BQD3 176 aa6.32□□□□□ -1.4
CHD6-203ENST00000373233 FAM118AQ9NWS6 357 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms