RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NOL11Q9H8H0 719 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 LYRM4Q9HD34 91 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 NECTIN3Q9NQS3 549 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 PRDM7Q9NQW5 492 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 PRTFDC1Q9NRG1 225 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 DAPP1Q9UN19 280 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 SYNDIG1LA6NDD5 238 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 A8MT66 165 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 CLDN9O95484 217 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 KLK2P20151 261 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 TAC1P20366 129 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 HIST1H1TP22492 207 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 ATP5A1P25705 553 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 CLCN2P51788 898 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 CCNG1P51959 295 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 GPR85P60893 370 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 EMC4Q5J8M3 183 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 MDGA2Q7Z553 956 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 UBE3DQ7Z6J8 389 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 SCUBE1Q8IWY4 988 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 ACOT4Q8N9L9 421 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 ACMSDQ8TDX5 336 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 CSF3RQ99062 836 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 MTERF1Q99551 399 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 DEFB127Q9H1M4 99 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR51B5Q9H339 312 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 PPCSQ9HAB8 311 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 TIMMDC1Q9NPL8 285 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 CCM2LQ9NUG4 571 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 DNAJB12Q9NXW2 375 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 TBK1Q9UHD2 729 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 RNF11Q9Y3C5 154 aa17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZNF469Q96JG9 3925 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-204ENST00000373166 TRBV11-1A0A0K0K1C0 115 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 A8MUA0 341 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 SAP18O00422 153 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 RTCAO00442 366 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR7A17O14581 309 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 ITGA10O75578 1167 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 SCELO95171 688 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 RPS17P08708 135 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 GXYLT1Q4G148 440 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 DEPDC1Q5TB30 811 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZNF793Q6ZN11 406 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 MMP21Q8N119 569 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 B3GNT7Q8NFL0 401 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR52B6Q8NGF0 335 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR10Q1Q8NGQ4 319 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 RGMAQ96B86 450 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 NSUN5Q96P11 429 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 CDK15Q96Q40 435 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 SEMA4BQ9NPR2 832 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 FBXW2Q9UKT8 454 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 ABCA2Q9BZC7 2435 aa17.79■□□□□ 0.44
TRAPPC3-204ENST00000373166 NPIPA2E9PIF3 369 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 NPIPA3F8WFD2 350 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 GOLGA8RI6L899 631 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 CYR61O00622 381 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 GSTA1P08263 222 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 PTX3P26022 381 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 HNRNPFP52597 415 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 RPS13P62277 151 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 PPIAP62937 165 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 TTC19Q6DKK2 380 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR4C11Q6IEV9 310 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 CLNKQ7Z7G1 428 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 RNF175Q8N4F7 328 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 APCDD1LQ8NCL9 501 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 TMEM52Q8NDY8 209 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 NTMT1Q9BV86 223 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 ANKZF1Q9H8Y5 726 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 TMEM216Q9P0N5 145 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 ERVK-11Q9UQG0 969 aa17.78■□□□□ 0.44
TRAPPC3-204ENST00000373166 NAV3Q8IVL0 2385 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ANKHD1Q8IWZ3 2542 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ACOT7O00154 380 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZNF500O60304 480 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 MYO1DO94832 1006 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 OTCP00480 354 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 SHBGP04278 402 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 SBK3P0C264 359 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 PYGBP11216 843 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ACVR2AP27037 513 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 SSR4P51571 173 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ARFIP1P53367 373 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 PLGLB1Q02325 96 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 TRAF3Q13114 568 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 TERF2Q15554 542 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 C10orf62Q5T681 223 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 RGS9BPQ6ZS82 235 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 TMEM151AQ8N4L1 468 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 WDR20Q8TBZ3 569 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZNF483Q8TF39 744 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 MZB1Q8WU39 189 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 MAPKAP1Q9BPZ7 522 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 POLDIP3Q9BY77 421 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZBTB26Q9HCK0 441 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 PNO1Q9NRX1 252 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 KCMF1Q9P0J7 381 aa17.77■□□□□ 0.44
TRAPPC3-204ENST00000373166 EDARQ9UNE0 448 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms