RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NIPAL4Q0D2K0 466 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 NFE2L1Q14494 772 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 CARD17Q5XLA6 110 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 FUBP3Q96I24 572 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■■■□ 26.4
HCFC1-202ENST00000369984 PPP4R1LQ9P1A2 415 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 MIA3Q5JRA6 1907 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 SCN8AQ9UQD0 1980 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 DNASE1P24855 282 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 CTBP2P56545 445 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 ACTC1P68032 377 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 ACTA1P68133 377 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 DYRK1AQ13627 763 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 ATP6AP1Q15904 470 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 FAM110CQ1W6H9 321 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 TMPRSS12Q86WS5 348 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 RDH12Q96NR8 316 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 PAQR5Q9NXK6 330 aaPredicted RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 SERTAD3Q9UJW9 196 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 VNN1O95497 513 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 EVI2BP34910 448 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 MAP2K3P46734 347 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 DNAJB13P59910 316 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 PLP2Q04941 152 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF574Q6ZN55 896 aaPredicted RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 SLCO2A1Q92959 643 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 NTAN1Q96AB6 310 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 RBP7Q96R05 134 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 P2RY13Q9BPV8 354 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 OSBPL2Q9H1P3 480 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 PPA2Q9H2U2 334 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF395Q9H8N7 513 aaPredicted RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 STUB1Q9UNE7 303 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 ZFR2Q9UPR6 939 aaKnown RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 MT-CO2P00403 227 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 DEFA6Q01524 100 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 PPP1R3AQ16821 1122 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 SOWAHAQ2M3V2 549 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 LRIT3Q3SXY7 679 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 COMMD7Q86VX2 200 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 KIF18BQ86Y91 864 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 AVL9Q8NBF6 648 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 TSTD1Q8NFU3 115 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 HEXBP07686 556 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 LEPRP48357 1165 aaKnown RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 RNF144AP50876 292 aaPredicted RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 OR4K1Q8NGD4 311 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 DNAJA3Q96EY1 480 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 LRCH3Q96II8 777 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 OR2M4Q96R27 311 aa11.97□□□□□ -0.49
HCFC1-202ENST00000369984 SECISBP2Q96T21 854 aaKnown RBP11.97□□□□□ -0.49
HCFC1-202ENST00000369984 C2orf72A6NCS6 295 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 MMP20O60882 483 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 IRF2P14316 349 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 FKBP1BP68106 108 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 OLIG2Q13516 323 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 NANOGP8Q6NSW7 305 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 Q6ZVU0 165 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 OR51D1Q8NGF3 324 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 C22orf15Q8WYQ4 148 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 KCTD13Q8WZ19 329 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 KIAA1191Q96A73 305 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF317Q96PQ6 595 aaPredicted RBP11.96□□□□□ -0.49
HCFC1-202ENST00000369984 DPCDQ9BVM2 203 aaPredicted RBP11.96□□□□□ -0.49
HCFC1-202ENST00000369984 POTEKPQ9BYX7 375 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 NANOGQ9H9S0 305 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 RXFP3Q9NSD7 469 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 CRYZL1O95825 349 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 SMPD1P17405 629 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 S100A7P31151 101 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 AGTR2P50052 363 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF84P51523 738 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 KCNC4Q03721 635 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 PXKQ7Z7A4 578 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 MUS81Q96NY9 551 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 GPATCH2Q9NW75 528 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 DLGAP4Q9Y2H0 992 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 A0A1W2PPW3 197 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 UPK3BL1B0FP48 263 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 UPK3BL2E5RIL1 263 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 PIP5K1CO60331 668 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 SNAP29O95721 258 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 CD9P21926 228 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF678Q5SXM1 525 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 GSG1LQ6UXU4 331 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 SMPDL3AQ92484 453 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.96□□□□□ -0.492e-6■■■□□ 18.9
HCFC1-202ENST00000369984 TDP1Q9NUW8 608 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 HOXA10P31260 410 aaPredicted RBP11.96□□□□□ -0.49
HCFC1-202ENST00000369984 FABP6P51161 128 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 FUT2Q10981 343 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 FADDQ13158 208 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 UGT2A3Q6UWM9 527 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 TICAM1Q8IUC6 712 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 SLC25A44Q96H78 314 aaPredicted RBP11.96□□□□□ -0.49
HCFC1-202ENST00000369984 C17orf62Q9BQA9 187 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 PLEKHM1Q9Y4G2 1056 aa11.96□□□□□ -0.49
HCFC1-202ENST00000369984 RGPD2P0DJD1 1756 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 GMDSO60547 372 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms