RNA–Protein interactions for RNA: ENST00000368759.5

BCCIP-203, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 1,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-203ENST00000368759 WLSQ5T9L3 541 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 RIPPLY2Q5TAB7 128 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 KHDRBS2Q5VWX1 349 aaKnown RBP11.98□□□□□ -0.49
BCCIP-203ENST00000368759 ARSKQ6UWY0 536 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 WDR53Q7Z5U6 358 aaPredicted RBP11.98□□□□□ -0.49
BCCIP-203ENST00000368759 CMC1Q7Z7K0 106 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 OR10G3Q8NGC4 313 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 SLC22A8Q8TCC7 542 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 UBTD2Q8WUN7 234 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 TSPAN17Q96FV3 270 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 FBXL20Q96IG2 436 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 DGAT2Q96PD7 388 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 ATOH8Q96SQ7 321 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 FOXC2Q99958 501 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 GPATCH1Q9BRR8 931 aaKnown RBP11.98□□□□□ -0.49
BCCIP-203ENST00000368759 ZNF717Q9BY31 904 aaPredicted RBP11.98□□□□□ -0.49
BCCIP-203ENST00000368759 PHACTR1Q9C0D0 580 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 ALG9Q9H6U8 611 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 RPF2Q9H7B2 306 aaKnown RBP11.98□□□□□ -0.49
BCCIP-203ENST00000368759 ZFP64Q9NPA5 681 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 ALKBH4Q9NXW9 302 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 CRIM1Q9NZV1 1036 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 RNF112Q9ULX5 631 aa11.98□□□□□ -0.49
BCCIP-203ENST00000368759 KIAA1549Q9HCM3 1950 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 A0A1W2PS29 197 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 FAM221AA4D161 298 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 UBXN8O00124 270 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 FAM155BO75949 473 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 FBXO45P0C2W1 286 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 SLC35E2BP0CK96 405 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 CD99P14209 185 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 COX7A2P14406 83 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 GP5P40197 560 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 GPX6P59796 221 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 RAB10P61026 200 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 HERVK_113P63132 956 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ERVK-8P63133 956 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 PLIN5Q00G26 463 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 PCDH1Q08174 1060 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 C2orf54Q08AI8 447 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 DDX39BQ13838 428 aaKnown RBP11.97□□□□□ -0.49
BCCIP-203ENST00000368759 EBPQ15125 230 aaKnown RBP11.97□□□□□ -0.49
BCCIP-203ENST00000368759 HIST2H2ACQ16777 129 aaPredicted RBP11.97□□□□□ -0.49
BCCIP-203ENST00000368759 DEPDC1Q5TB30 811 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 SLC22A10Q63ZE4 541 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 HIST2H2AA3Q6FI13 130 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 OR4C11Q6IEV9 310 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 GRHL2Q6ISB3 625 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 MED27Q6P2C8 311 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 POMZP3Q6PJE2 187 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ISCA2Q86U28 154 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ULK2Q8IYT8 1036 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 HUS1BQ8NHY5 278 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 NINJ1Q92982 152 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 UCN3Q969E3 161 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 CMTM7Q96FZ5 175 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 GAL3ST4Q96RP7 486 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 KRT12Q99456 494 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 CPNE1Q99829 537 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 SH3GL2Q99962 352 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ERVK-6Q9BXR3 956 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 EXO5Q9H790 373 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 SLC24A3Q9HC58 644 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 SAYSD1Q9NPB0 183 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 IGSF5Q9NSI5 407 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 NUDT4Q9NZJ9 180 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 RNF14Q9UBS8 474 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ST6GALNAC2Q9UJ37 374 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ERVK-19Q9WJR5 959 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 SPACA6W5XKT8 324 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 ITPR3Q14573 2671 aa11.97□□□□□ -0.49
BCCIP-203ENST00000368759 CCDC188H7C350 402 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 EEDO75530 441 aaKnown RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 URI1O94763 535 aaPredicted RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 MTHFD2P13995 350 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 GABRA1P14867 456 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 HOXB4P17483 251 aaPredicted RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 TRPC1P48995 793 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 SLC37A1P57057 533 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 KCNJ2P63252 427 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 ILF2Q12905 390 aaKnown RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 SPRED3Q2MJR0 410 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 CHSY3Q70JA7 882 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 GPR180Q86V85 440 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 TGIF2LYQ8IUE0 185 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 ZCCHC7Q8N3Z6 543 aaKnown RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 SLC15A4Q8N697 577 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 ZNF441Q8N8Z8 693 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 FAM13CQ8NE31 585 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 MYRIPQ8NFW9 859 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 NEIL3Q8TAT5 605 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 PYROXD1Q8WU10 500 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 POLDIP3Q9BY77 421 aaKnown RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 WWTR1Q9GZV5 400 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 ACKR4Q9NPB9 350 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 DMRT3Q9NQL9 472 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 RASSF1Q9NS23 344 aa11.96□□□□□ -0.49
BCCIP-203ENST00000368759 BOKQ9UMX3 212 aaPredicted RBP11.96□□□□□ -0.49
BCCIP-203ENST00000368759 FREM3P0C091 2139 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms