RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 BLKP51451 505 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CLNS1AP54105 237 aaKnown RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 MTTPP55157 894 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 NME5P56597 212 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 FOXM1Q08050 763 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 KIAA0040Q15053 153 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SPIN4Q56A73 249 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 TPRG1LQ5T0D9 272 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 PRMT9Q6P2P2 845 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CLEC18BQ6UXF7 455 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 RD3Q7Z3Z2 195 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 PARGQ86W56 976 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SLC22A18ASQ8N1D0 253 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 LIX1Q8N485 282 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CLEC18CQ8NCF0 446 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 OR52E1Q8NGJ3 308 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 TSACCQ96A04 125 aaPredicted RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 FCRL1Q96LA6 429 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SPAG4Q9NPE6 437 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 PRDM8Q9NQV8 689 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 TAC3Q9UHF0 121 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SLC7A8Q9UHI5 535 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 RUVBL1Q9Y265 456 aaKnown RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 COL5A1P20908 1838 aaPredicted RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 PTPRBP23467 1997 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 OR52A4PA6NMU1 304 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 A8MUI8 341 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 ANKRD28O15084 1053 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CFLARO15519 480 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 MYO1DO94832 1006 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CCNDBP1O95273 360 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 PCNAP12004 261 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CDH1P12830 882 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 F3P13726 295 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CD1EP15812 388 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CTSSP25774 331 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CD27P26842 260 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SHMT2P34897 504 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 UFM1P61960 85 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SNCBQ16143 134 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 IQCHQ86VS3 1027 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SIMC1Q8NDZ2 872 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 ABHD11Q8NFV4 315 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 HUS1BQ8NHY5 278 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 ZFPM2Q8WW38 1151 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 RLN3Q8WXF3 142 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 STARD8Q92502 1023 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 HDAC2Q92769 488 aaKnown RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 CXorf40BQ96DE9 158 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 MTERF1Q99551 399 aaKnown RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 HOPXQ9BPY8 73 aaPredicted RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 AIF1LQ9BQI0 150 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 DPY30Q9C005 99 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 TMEM168Q9H0V1 697 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 DENND2DQ9H6A0 471 aaPredicted RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 NT5DC2Q9H857 520 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SLC52A3Q9NQ40 469 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 OR6C2Q9NZP2 312 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 KCMF1Q9P0J7 381 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 TBC1D29Q9UFV1 150 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 BAIAP2L1Q9UHR4 511 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CROTQ9UKG9 612 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 A0A1B0GTW7 788 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 A0A1W2PPV9 198 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 MAGEB17A8MXT2 336 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 IL6P05231 212 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 BCKDHAP12694 445 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 AK4P27144 223 aaPredicted RBP8.31□□□□□ -1.08
TPM3-213ENST00000368545 ZFP36L2P47974 494 aaKnown RBP8.31□□□□□ -1.08
TPM3-213ENST00000368545 CCR8P51685 355 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 CXADRP78310 365 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 TLE1Q04724 770 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 ACSM2AQ08AH3 577 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 DDX39BQ13838 428 aaKnown RBP8.31□□□□□ -1.08
TPM3-213ENST00000368545 VPS26BQ4G0F5 336 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 PIGGQ5H8A4 983 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 C1orf146Q5VVC0 180 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 ACSM2BQ68CK6 577 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 C8orf82Q6P1X6 216 aaPredicted RBP8.31□□□□□ -1.08
TPM3-213ENST00000368545 SLC30A9Q6PML9 568 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 PCSK4Q6UW60 755 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 TMIGD1Q6UXZ0 262 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 LINC01555Q8NAE3 123 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 IFI44Q8TCB0 444 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 STMN2Q93045 179 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 TEX37Q96LM6 180 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 ACTL8Q9H568 366 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 BCAP29Q9UHQ4 241 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 ICKQ9UPZ9 632 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 SH2B3Q9UQQ2 575 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 TRIOO75962 3097 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 TP53BP1Q12888 1972 aaPredicted RBP8.31□□□□□ -1.08
TPM3-213ENST00000368545 HEATR5BQ9P2D3 2071 aa8.31□□□□□ -1.08
TPM3-213ENST00000368545 C15orf38-AP3S2A0A0A6YYH1 394 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 KIR2DS5A0A0G2JLQ3 304 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 A0A0G2JNG1 304 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 OR5K4A6NMS3 321 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 KIR2DS3K7RE56 304 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 YKT6O15498 198 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms