RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 DCST1Q5T197 706 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 PIP5KL1Q5T9C9 394 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 ADGRD2Q7Z7M1 963 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 AMER2Q8N7J2 671 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 MGLLQ99685 303 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 YIPF4Q9BSR8 244 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 A4GALTQ9NPC4 353 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 DNAJC27Q9NZQ0 273 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 TRPC4Q9UBN4 977 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 SEC14L3Q9UDX4 400 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 HCN2Q9UL51 889 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 C1QTNF3-AMACRE9PGA6 284 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 SEMA3DO95025 777 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 PAK4O96013 591 aaPredicted RBP17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 SLC35G4P0C7Q5 338 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 IRF3Q14653 427 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 ADAMTSL4Q6UY14 1074 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 KIAA1958Q8N8K9 716 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 SP7Q8TDD2 431 aaPredicted RBP17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 TREX2Q9BQ50 279 aaPredicted RBP17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 UCK2Q9BZX2 261 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 ZNF229Q9UJW7 825 aa17.16■□□□□ 0.34
UBQLN4-201ENST00000368309 MID1O15344 667 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 NDUFS4O43181 175 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 CKMT1AP12532 417 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 CD72P21854 359 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 EIF2DP41214 584 aaKnown RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 EIF4HQ15056 248 aaKnown RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 FBXO43Q4G163 708 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 COMTD1Q86VU5 262 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 NUDT13Q86X67 352 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 ZBTB8BQ8NAP8 495 aaPredicted RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 RGMAQ96B86 450 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 ASB16Q96NS5 453 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 TEFMQ96QE5 360 aaKnown RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 PELI2Q9HAT8 420 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 CTPS2Q9NRF8 586 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 SEMA3GQ9NS98 782 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 IMP3Q9NV31 184 aaKnown RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 ERGP11308 486 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 ELAVL4P26378 380 aaKnown RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 GPC1P35052 558 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 LSM11P83369 360 aaKnown RBP eCLIP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 SLC30A8Q8IWU4 369 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 FAM46DQ8NEK8 389 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 HTRA1Q92743 480 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 FGF13Q92913 245 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 ZBED6CLQ96FA7 236 aaPredicted RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 C12orf66Q96MD2 445 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 NEUROD4Q9HD90 331 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 WASH6PQ9NQA3 447 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 REV1Q9UBZ9 1251 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 PCDHGA3Q9Y5H0 932 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 MYO10Q9HD67 2058 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 AGAP5A6NIR3 686 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 M0R3H8 397 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 TLR4O00206 839 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 GTF2E2P29084 291 aaKnown RBP17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 TAS2R38P59533 333 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 ARHGAP19Q14CB8 494 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 TPRG1LQ5T0D9 272 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 CYP4Z2PQ8N1L4 340 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 DPH7Q9BTV6 452 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 KLHL31Q9H511 634 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 MVB12BQ9H7P6 319 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 SACM1LQ9NTJ5 587 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 CLEC2DQ9UHP7 191 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 KCNK6Q9Y257 313 aa17.15■□□□□ 0.34
UBQLN4-201ENST00000368309 EFCAB10A6NFE3 127 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ATP6V1G1O75348 118 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 H1F0P07305 194 aaKnown RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 TNNI3P19429 210 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 DRD3P35462 400 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 TARDBPQ13148 414 aaKnown RBP eCLIP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 PLAG1Q6DJT9 500 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 SLC7A13Q8TCU3 470 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 CRELD1Q96HD1 420 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 INSM2Q96T92 566 aaPredicted RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 OR51I1Q9H343 314 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 SERGEFQ9UGK8 458 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 PLEKHM1Q9Y4G2 1056 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 RPN2P04844 631 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 OSMP13725 252 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 CSNK1G2P78368 415 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 REEP5Q00765 189 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 COL9A2Q14055 689 aaPredicted RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ZNF750Q32MQ0 723 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 FAM83FQ8NEG4 500 aaPredicted RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 CAB39Q9Y376 341 aaPredicted RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ATG2BQ96BY7 2078 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 HEATR5BQ9P2D3 2071 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ALPK3Q96L96 1907 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 IGKV1-8A0A0C4DH67 115 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 KIAA0513O60268 411 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 ERAL1O75616 437 aaKnown RBP17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 NR2F1P10589 423 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 SSR2P43308 183 aa17.14■□□□□ 0.33
UBQLN4-201ENST00000368309 KCNJ5P48544 419 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms