RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 RNF130Q86XS8 419 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 NPAS4Q8IUM7 802 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 OR51G2Q8NGK0 314 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 ZNF442Q9H7R0 627 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 DAOAP59103 153 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 PPA1Q15181 289 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 FAM214AQ32MH5 1076 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 VARS2Q5ST30 1063 aaKnown RBP11.95□□□□□ -0.5
TPR-201ENST00000367478 LGALS12Q96DT0 336 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 TP63Q9H3D4 680 aaPredicted RBP11.95□□□□□ -0.5
TPR-201ENST00000367478 A0A096LPI6 279 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 PBX1P40424 430 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 SPHARQ15513 63 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 UPRTQ96BW1 309 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 C2orf42Q9NWW7 574 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 MMP20O60882 483 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 FKTNO75072 461 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 LSSP48449 732 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 MEP1AQ16819 746 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 PHF19Q5T6S3 580 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 OR9A1PQ8NGU1 263 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 MYLIPQ8WY64 445 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 REEP4Q9H6H4 257 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 SOX14O95416 240 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 OR9A4Q8NGU2 314 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
TPR-201ENST00000367478 TSGA13Q96PP4 275 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 ACSS2Q9NR19 701 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 SLC2A4RGQ9NR83 387 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 NAALAD2Q9Y3Q0 740 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 CPQQ9Y646 472 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
TPR-201ENST00000367478 GPR22Q99680 433 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 EBF4Q9BQW3 602 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 CD244Q9BZW8 370 aa11.95□□□□□ -0.5
TPR-201ENST00000367478 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.95□□□□□ -0.57e-7■□□□□ 10
TPR-201ENST00000367478 UNC119BA6NIH7 251 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 BOLA2-SMG1P6H3BVE0 249 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 TOXO94900 526 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CCL23P55773 120 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 PLEKHS1Q5SXH7 462 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ADGRF1Q5T601 910 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ANKRD54Q6NXT1 300 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 TIFABQ6ZNK6 161 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CHDHQ8NE62 594 aaPredicted RBP11.94□□□□□ -0.5
TPR-201ENST00000367478 DPCDQ9BVM2 203 aaPredicted RBP11.94□□□□□ -0.5
TPR-201ENST00000367478 CACNG6Q9BXT2 260 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 HSD17B7P56937 341 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 SERINC3Q13530 473 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 PNCKQ6P2M8 343 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ENPP7Q6UWV6 458 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 XKR5Q6UX68 686 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
TPR-201ENST00000367478 GDPGP1Q6ZNW5 385 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 PPA2Q9H2U2 334 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 STMND1H3BQB6 276 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 RDH16O75452 317 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 PRKCAP17252 672 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 AKR1C4P17516 323 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 VIPR1P32241 457 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CLCNKAP51800 687 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CLCNKBP51801 687 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 HK3P52790 923 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 NOGQ13253 232 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 SSX2Q16385 188 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CLVS2Q5SYC1 327 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ZC3H14Q6PJT7 736 aaKnown RBP11.94□□□□□ -0.5
TPR-201ENST00000367478 EGFL6Q8IUX8 553 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 SVBPQ8N300 66 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CDKN2AIPNLQ96HQ2 116 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 BEX2Q9BXY8 128 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 BEX1Q9HBH7 125 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CRYZL1O95825 349 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 EDNRBP24530 442 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 HMGCS1Q01581 520 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ZNF436Q9C0F3 470 aaPredicted RBP11.94□□□□□ -0.5
TPR-201ENST00000367478 STRADBQ9C0K7 418 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 RPS10P5Q9NQ39 176 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 FAM159BA6NKW6 160 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 FHP07954 510 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 BRCC3P46736 316 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 FAM69AQ5T7M9 428 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 OR8K5Q8NH50 307 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 NELL2Q99435 816 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 C17orf62Q9BQA9 187 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 HDHD5Q9BXW7 423 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 SLC38A8A6NNN8 435 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 NIPSNAP2O75323 286 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ZNF254O75437 659 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 IRF9Q00978 393 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CAMK2DQ13557 499 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 C1orf94Q6P1W5 598 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 SLC22A25Q6T423 547 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ARNTL2Q8WYA1 636 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 ARL5BQ96KC2 179 aa11.94□□□□□ -0.5
TPR-201ENST00000367478 CDK15Q96Q40 435 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms