RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 PCDHGB5Q9Y5G0 923 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 A0A0A6YYC8 382 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 G3V2L1 256 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 I3L1I5 382 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 CACNG3O60359 315 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 AK1P00568 194 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ABOP16442 354 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ARSFP54793 590 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 EEF1A2Q05639 463 aaKnown RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ZUFSPQ96AP4 578 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ADAD1Q96M93 576 aaKnown RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 CCDC106Q9BWC9 280 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 B3GNT4Q9C0J1 378 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 GPN2Q9H9Y4 310 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 TNFRSF10DQ9UBN6 386 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 A6NLC8 198 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 LOC110117498-PIK3R3F6TDL0 507 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 H3BNC9 293 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ATXN1LP0C7T5 689 aaKnown RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 MBTPS1Q14703 1052 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 METTL2BQ6P1Q9 378 aaKnown RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 AQP11Q8NBQ7 271 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 C11orf24Q96F05 449 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 OR51I1Q9H343 314 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 C5AR2Q9P296 337 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 TCRBV5S1A1TA0A578 114 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 SGK494L7N484 410 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF821O75541 412 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 H6PDO95479 791 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ITGB8P26012 769 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 FMO3P31513 532 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 SLC6A6P31641 620 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 ENTPD1P49961 510 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 TAZQ16635 292 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 GPR149Q86SP6 731 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 RAB43Q86YS6 212 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 DCP2Q8IU60 420 aaKnown RBP11.06□□□□□ -0.64
SYNE1-204ENST00000367248 KLHL36Q8N4N3 616 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 PKP2Q99959 881 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 DUSP23Q9BVJ7 150 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 CWH43Q9H720 699 aa11.06□□□□□ -0.64
SYNE1-204ENST00000367248 CCDC182A6NF36 153 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ANXA2P2A6NMY6 339 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ANXA2P07355 339 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 PRKACGP22612 351 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 SFTPDP35247 375 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CCL11P51671 97 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF765Q7L2R6 523 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 OR5L2Q8NGL0 311 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 NXPE3Q969Y0 559 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF99A8MXY4 864 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CXCL10P02778 98 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 HMGA1P17096 107 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 FAUP35544 74 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 MLLT10P55197 1068 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 PMS2P3Q13401 168 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 KIR2DS3Q14952 304 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ARL14Q8N4G2 192 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 OR7G3Q8NG95 312 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 SNIP1Q8TAD8 396 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 KCNN1Q92952 543 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CNDP2Q96KP4 475 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 OR51B6Q9H340 312 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 KCNK12Q9HB15 430 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 TCF7L1Q9HCS4 588 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 MGAT4BQ9UQ53 548 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 EFCAB9A8MZ26 197 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 GFRA2O00451 464 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 TNFRSF21O75509 655 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 RPS17P08708 135 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 EMP2P54851 167 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ERV3-1Q14264 604 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 SWT1Q5T5J6 900 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 GRHL2Q6ISB3 625 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 LMNTD1Q8N9Z9 388 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 WDR12Q9GZL7 423 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 GPR39O43194 453 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ARHGEF15O94989 841 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 HBQ1P09105 142 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 RPS26P62854 115 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 LCTLQ6UWM7 567 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CARM1Q86X55 608 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ABHD5Q8WTS1 349 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 FRMD6Q96NE9 622 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 TIMM29Q9BSF4 260 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CDC14CA4D256 554 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 UGDHO60701 494 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 NOS1APO75052 506 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 SNNO75324 88 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 EEDO75530 441 aaKnown RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ALDH3A2P51648 485 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CDH11P55287 796 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 FCHO2Q0JRZ9 810 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CEACAM7Q14002 265 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 KIAA0895LQ68EN5 471 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 C6orf89Q6UWU4 347 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 CNEP1R1Q8N9A8 125 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 PRSS16Q9NQE7 514 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms