RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ZDHHC24Q6UX98 284 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 TAOK1Q7L7X3 1001 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.21
CTSD-202ENST00000367196 OR4N5Q8IXE1 308 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 CENPLQ8N0S6 344 aaPredicted RBP13.71□□□□□ -0.21
CTSD-202ENST00000367196 ZNF295-AS1Q8N0V1 137 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 MARVELD2Q8N4S9 558 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 TMEM251Q8N6I4 163 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 ACBD4Q8NC06 268 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 LILRB4Q8NHJ6 448 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
CTSD-202ENST00000367196 SARAFQ96BY9 339 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 TREX2Q9BQ50 279 aaPredicted RBP13.71□□□□□ -0.21
CTSD-202ENST00000367196 CNPPD1Q9BV87 410 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 LDAHQ9H6V9 325 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 EXO5Q9H790 373 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 MCCC2Q9HCC0 563 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 B4GALT7Q9UBV7 327 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 TMCO1Q9UM00 188 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 ATG4BQ9Y4P1 393 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 CCDC168Q8NDH2 2452 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 A0A0G2JMM0 328 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 A0A1B0GVC2 190 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 A0A1W2PPB8 328 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 A0A1W2PRS3 328 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 FAM90A27PA6NNH2 459 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 KIR3DP1A8MWS1 328 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 G3V3Y1 287 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 FOXE1O00358 373 aaPredicted RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 AQP7O14520 342 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 KLK8O60259 260 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 HCN1O60741 890 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 WDR1O75083 606 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 GPR75O95800 540 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 HOXD4P09016 255 aaPredicted RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 CCL3P10147 92 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 TYK2P29597 1187 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 GMPRP36959 345 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 MAGEA5P43359 124 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 MAN2A2P49641 1150 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 HNRNPH2P55795 449 aaKnown RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 RPS13P62277 151 aaKnown RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 IRF9Q00978 393 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 GUCY2DQ02846 1103 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 PMPCAQ10713 525 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 SLC10A1Q14973 349 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 CPSF6Q16630 551 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTSD-202ENST00000367196 GXYLT1Q4G148 440 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 WLSQ5T9L3 541 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 C6orf163Q5TEZ5 329 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 B3GNT6Q6ZMB0 384 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 TRILQ7L0X0 811 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 PAQR8Q8TEZ7 354 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 RIT1Q92963 219 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 SPACA9Q96E40 222 aaPredicted RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 GAL3ST4Q96RP7 486 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 SORBS1Q9BX66 1292 aaKnown RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 DDX31Q9H8H2 851 aaKnown RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 IPPKQ9H8X2 491 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 CNIH4Q9P003 139 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 MTRF1LQ9UGC7 380 aaKnown RBP13.7□□□□□ -0.22
CTSD-202ENST00000367196 IKBKGQ9Y6K9 419 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 FBN2P35556 2912 aa13.7□□□□□ -0.22
CTSD-202ENST00000367196 EML6Q6ZMW3 1958 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 ANKRD17O75179 2603 aaKnown RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 OTOGQ6ZRI0 2925 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 A0A0A6YYD5 115 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 PROM1O43490 865 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 SEMA3DO95025 777 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 CLDN9O95484 217 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 INHBAP08476 426 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 GABRA1P14867 456 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 MSX1P28360 303 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 DNASE1L1P49184 302 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 TMED10P49755 219 aaKnown RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 HERVK_113P63132 956 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 ERVK-8P63133 956 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 FOXO1Q12778 655 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
CTSD-202ENST00000367196 EMC4Q5J8M3 183 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 TBCELQ5QJ74 424 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 C18orf63Q68DL7 685 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 OR52E8Q6IFG1 317 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 ZNF585AQ6P3V2 769 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 GOLGA7Q7Z5G4 137 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 CLYBLQ8N0X4 340 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 FBXW8Q8N3Y1 598 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 L3MBTL4Q8NA19 623 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 FAM13CQ8NE31 585 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 OR10Q1Q8NGQ4 319 aa13.69□□□□□ -0.22
CTSD-202ENST00000367196 PPWD1Q96BP3 646 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms