RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 NDRG3Q9UGV2 375 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 AMFRQ9UKV5 643 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 BOKQ9UMX3 212 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 DHRS7Q9Y394 339 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 CLCA3PQ9Y6N3 262 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 C17orf105B2RV13 164 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 E5RI56 91 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 OVOL3O00110 214 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 KLF4O43474 513 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 SPRY1O43609 319 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 NDUFS7O75251 213 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 TRAPPC6AO75865 159 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 TJP3O95049 919 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 RCBTB2O95199 551 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 TGM6O95932 706 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 GAS8O95995 478 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 IGKV3-11P04433 115 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 FREM3P0C091 2139 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 MGAT1P26572 445 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 GRK3P35626 688 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 AHRP35869 848 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 ACVR1BP36896 505 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 PGGT1BP53609 377 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 RAB38P57729 211 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 OASLQ15646 514 aaKnown RBP7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 ADNP2Q6IQ32 1131 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 DENND6AQ8IWF6 608 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 PM20D2Q8IYS1 436 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 FAM13CQ8NE31 585 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 OR56A3Q8NH54 315 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 SLC22A8Q8TCC7 542 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZPLD1Q8TCW7 415 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 EEF1AKMT1Q8WVE0 214 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 STARD4Q96DR4 205 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 MS4A6EQ96DS6 147 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 IQCDQ96DY2 449 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZC3HAV1LQ96H79 300 aaKnown RBP7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 CCDC42Q96M95 316 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 TCF12Q99081 682 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 KIFC1Q9BW19 673 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 ANGPTL4Q9BY76 406 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 EIF2B3Q9NR50 452 aaKnown RBP7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 FBXO6Q9NRD1 293 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 ABHD10Q9NUJ1 306 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 CLCF1Q9UBD9 225 aa7.71□□□□□ -1.18
HMGB1P39-201ENST00000366304 HEATR5AQ86XA9 2040 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 A0A1W2PNV4 684 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 CTNSO60931 367 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 LDB3O75112 727 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 TP53P04637 393 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 APRTP07741 180 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 CERS1P27544 350 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 ADH6P28332 368 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 UGT2B10P36537 528 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 FDFT1P37268 417 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 RPL21P46778 160 aaKnown RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 LIM2P55344 173 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 SKP1P63208 163 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 C6orf52Q5T4I8 152 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 ANKRD34AQ69YU3 496 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 MRNIPQ6NTE8 343 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 NIPAL1Q6NVV3 410 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 VWA1Q6PCB0 445 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 VN1R5Q7Z5H4 357 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 SDCCAG8Q86SQ7 713 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 YRDCQ86U90 279 aaKnown RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 ZNF595Q8IYB9 648 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 OR14A16Q8NHC5 309 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 LILRB1Q8NHL6 650 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 TMEM171Q8WVE6 324 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 DAZLQ92904 295 aaKnown RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 ABTB1Q969K4 478 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 SENP5Q96HI0 755 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 RUNDC3BQ96NL0 473 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 DOHHQ9BU89 302 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 MED18Q9BUE0 208 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 OPN3Q9H1Y3 402 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 CNIH4Q9P003 139 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 KLHL42Q9P2K6 505 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 HEY2Q9UBP5 337 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 PACSIN3Q9UKS6 424 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 IKZF3Q9UKT9 509 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 C15orf41Q9Y2V0 281 aa7.7□□□□□ -1.18
HMGB1P39-201ENST00000366304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 TCRBV7S3A2A0A539 114 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 LRIT2A6NDA9 550 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 LRRC14BA6NHZ5 514 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 E7EVH7 732 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 ADAM11O75078 769 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 IGHV4-39P01824 125 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 CLPSP04118 112 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SERPINA6P08185 405 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 SOD3P08294 240 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 ENO3P13929 434 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 CPN1P15169 458 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 OGNP20774 298 aaKnown RBP7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 CD79BP40259 229 aa7.69□□□□□ -1.18
HMGB1P39-201ENST00000366304 MAGEA1P43355 309 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms