RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 C6orf50Q9HD87 102 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 XPNPEP1Q9NQW7 623 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 HBS1LQ9Y450 684 aaKnown RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 MYO10Q9HD67 2058 aa5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 MAP1BP46821 2468 aaKnown RBP5.04□□□□□ -1.6
RNU4-39P-201ENST00000362455 A0A087WWV3 80 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SMIM30A4D0T7 59 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 C17orf105B2RV13 164 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 O00370 1275 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 B4GALT5O43286 388 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 CIDEAO60543 219 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 KINO60870 393 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 APOHP02749 345 aaPredicted RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 UROSP10746 265 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 PAX1P15863 534 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SFNP31947 248 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 NPBWR1P48145 328 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 TRAP1Q12931 704 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 GPR17Q13304 367 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SQLEQ14534 574 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF718Q3SXZ3 478 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF672Q499Z4 452 aaPredicted RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC39A12Q504Y0 691 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 ZNF789Q5FWF6 425 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 FUT10Q6P4F1 479 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 MEX3DQ86XN8 651 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 GPR65Q8IYL9 337 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 AMER3Q8N944 861 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 CCDC63Q8NA47 563 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 RNF149Q8NC42 400 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 KBTBD8Q8NFY9 601 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 URGCPQ8TCY9 931 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SLC26A7Q8TE54 656 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 RSPH1Q8WYR4 309 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SNRNP40Q96DI7 357 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 NDNQ99608 321 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 TEKT3Q9BXF9 490 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 SHARPINQ9H0F6 387 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 RIMS4Q9H426 269 aaPredicted RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 NXF3Q9H4D5 531 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 KCNMB3Q9NPA1 279 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 CHST11Q9NPF2 352 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 C2orf42Q9NWW7 574 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 GMEB2Q9UKD1 530 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 GPR132Q9UNW8 380 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 RUVBL2Q9Y230 463 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 CHKBQ9Y259 395 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 ANKRD11Q6UB99 2663 aaPredicted RBP5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 NID2Q14112 1375 aa5.03□□□□□ -1.6
RNU4-39P-201ENST00000362455 CNTNAP2Q9UHC6 1331 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 SPEGQ15772 3267 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 TMEM150CB9EJG8 249 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCL16O15467 120 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 FGF17O60258 216 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLITRK3O94933 977 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 MOCS2O96007 188 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 EDN1P05305 212 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 C8orf89P0DMQ9 161 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 ARF4P18085 180 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 GLRA2P23416 452 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 FCARP24071 287 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 GNA11P29992 359 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 CEACAM8P31997 349 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 ARL2P36404 184 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 QARSP47897 775 aaKnown RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 KHKP50053 298 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 ADARP55265 1226 aaKnown RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 EVCP57679 992 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 PSMC5P62195 406 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 ACTN3Q08043 901 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 IL10RBQ08334 325 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 AP1B1Q10567 949 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 MLF2Q15773 248 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 LPAL2Q16609 132 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLC25A53Q5H9E4 307 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 PLBD1Q6P4A8 553 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 C19orf48Q6RUI8 117 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 RBMS3Q6XE24 437 aaKnown RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 SMIM29Q86T20 159 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 SIAH3Q8IW03 269 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCDC83Q8IWF9 413 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 FBXL16Q8N461 479 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 UBLCP1Q8WVY7 318 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 TM9SF4Q92544 642 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 ATG101Q9BSB4 218 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 SDCBP2Q9H190 292 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 PRMT8Q9NR22 394 aaPredicted RBP5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 HEBP1Q9NRV9 189 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 FLRT3Q9NZU0 649 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 ADAM28Q9UKQ2 775 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 KLK4Q9Y5K2 254 aa5.02□□□□□ -1.61
RNU4-39P-201ENST00000362455 A0A1B0GUA9 196 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 ILVBLA1L0T0 632 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 P2RY10O00398 339 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 ZNF197O14709 1029 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 TTI1O43156 1089 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 RTN2O75298 545 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms