RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TREML1Q86YW5 311 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 METTL27Q8N6F8 245 aaPredicted RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 THEM6Q8WUY1 208 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 EDIL3O43854 480 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 HSD17B1P14061 328 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 HOXD9P28356 352 aaPredicted RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 P2RY2P41231 377 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 GK3PQ14409 553 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 OR7G3Q8NG95 312 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 TOR3AQ9H497 397 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 LAMP5Q9UJQ1 280 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 GRIP1Q9Y3R0 1128 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 MFSD13AQ14CX5 517 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 TRAM1Q15629 374 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 FAM129BQ96TA1 746 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ZNF559Q9BR84 538 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 MCOLN1Q9GZU1 580 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 MYH7P12883 1935 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 C17orf113A0A1B0GUU1 675 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 FEZF1A0PJY2 475 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 BLACEA4D250 179 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 CDC123O75794 336 aaPredicted RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 DIRAS1O95057 198 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 F11P03951 625 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 CD6P30203 668 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 RPS3AP61247 264 aaKnown RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 CBX3Q13185 183 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 GAS6Q14393 721 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 NSDHLQ15738 373 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 SLITRK4Q8IW52 837 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 HDAC2Q92769 488 aaKnown RBP12.87□□□□□ -0.35
LDB3-202ENST00000361373 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 AP1M2Q9Y6Q5 423 aa12.87□□□□□ -0.35
LDB3-202ENST00000361373 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 TAZQ16635 292 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 FAM78AQ5JUQ0 283 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 CES4AQ5XG92 561 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 TMEM107Q6UX40 140 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
LDB3-202ENST00000361373 TCEANCQ8N8B7 351 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 GAL3ST3Q96A11 431 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 TOE1Q96GM8 510 aaKnown RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 ACTRT3Q9BYD9 372 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 TTYH1Q9H313 450 aaPredicted RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 ACTR10Q9NZ32 417 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 NPIPA2E9PIF3 369 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 NPIPA3F8WFD2 350 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 G3V2L1 256 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 J3QLW9 94 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 ABLIM3O94929 683 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 CH25HO95992 272 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 RPS17P08708 135 aaKnown RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 GLI3P10071 1580 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 ZNF19P17023 458 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 HLA-FP30511 346 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 CASP6P55212 293 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 OGFOD2Q6N063 350 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 LINGO2Q7L985 606 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 GHDCQ8N2G8 530 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 CCDC107Q8WV48 283 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 DNAJA4Q8WW22 397 aaPredicted RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 ZFP3Q96NJ6 502 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 NTMT1Q9BV86 223 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 MARCH5Q9NX47 278 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 MEMO1Q9Y316 297 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 MC1RQ01726 317 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 LRRC26Q2I0M4 334 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 NDUFAF5Q5TEU4 345 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 UNQ6126/PRO20091Q6UXV3 157 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 TMEM130Q8N3G9 435 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 OR5AR1Q8NGP9 310 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 TANKQ92844 425 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 MTG2Q9H4K7 406 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 BTNL2Q9UIR0 455 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 UNC119BA6NIH7 251 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 INMTO95050 263 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 CD72P21854 359 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 PRLHRP49683 370 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 GDI2P50395 445 aaKnown RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 ARF5P84085 180 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 POU4F2Q12837 409 aa12.86□□□□□ -0.35
LDB3-202ENST00000361373 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
LDB3-202ENST00000361373 MINDY2Q8NBR6 621 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms