RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 ANKRD34BA5PLL1 514 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 FHP07954 510 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 LAMP1P11279 417 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 ZNF30P17039 623 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 AMD1P17707 334 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 CHMP24386 653 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 EDNRBP24530 442 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 MTNR1AP48039 350 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 GDI2P50395 445 aaKnown RBP13.36□□□□□ -0.27
SMC5-201ENST00000361138 DAPP51397 102 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 PON3Q15166 354 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 SLC22A10Q63ZE4 541 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 EIF5AL1Q6IS14 154 aaKnown RBP13.36□□□□□ -0.27
SMC5-201ENST00000361138 NAGSQ8N159 534 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 FARSAQ9Y285 508 aaKnown RBP13.36□□□□□ -0.27
SMC5-201ENST00000361138 UGT2A1Q9Y4X1 527 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 AKAP11Q9UKA4 1901 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 ARPC4-TTLL3A0A0A6YYG9 625 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 DUSP11O75319 330 aaKnown RBP13.36□□□□□ -0.27
SMC5-201ENST00000361138 IQCF3P0C7M6 154 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 PDHA2P29803 388 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 FAM189BP81408 668 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 MC1RQ01726 317 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 ADPRMQ3LIE5 342 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 IQCF1Q8N6M8 205 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 OR2L3Q8NG85 312 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 HSPA12BQ96MM6 686 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 RAB11FIP5Q9BXF6 653 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 METTL8Q9H825 291 aaKnown RBP13.36□□□□□ -0.27
SMC5-201ENST00000361138 ACSL6Q9UKU0 697 aa13.36□□□□□ -0.27
SMC5-201ENST00000361138 UNC119BA6NIH7 251 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 GPR32O75388 356 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 ALPPL2P10696 532 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 TCEAL5Q5H9L2 206 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 ENPP4Q9Y6X5 453 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 C13orf42A0A1B0GVH6 325 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 KMOO15229 486 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 HTR1AP08908 422 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 HRH2P25021 359 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 SLC6A6P31641 620 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 TATDN3Q17R31 274 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 OR9A1PQ8NGU1 263 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 NANSQ9NR45 359 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 PLEKHA6Q9Y2H5 1048 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 CACNA1SQ13698 1873 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 CCL16O15467 120 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 ERI3O43414 337 aaKnown RBP13.35□□□□□ -0.27
SMC5-201ENST00000361138 CTSEP14091 401 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 CDKN1CP49918 316 aaPredicted RBP13.35□□□□□ -0.27
SMC5-201ENST00000361138 MEF2AQ02078 507 aaPredicted RBP13.35□□□□□ -0.27
SMC5-201ENST00000361138 GK2Q14410 553 aaPredicted RBP13.35□□□□□ -0.27
SMC5-201ENST00000361138 BRAT1Q6PJG6 821 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 SYT14Q8NB59 555 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 ADAMTS19Q8TE59 1207 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 NUMBLQ9Y6R0 609 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 CTDSP2O14595 271 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 NDUFS4O43181 175 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 CD9P21926 228 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 HTR2AP28223 471 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 S100A2P29034 98 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 PREPP48147 710 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 GRK1Q15835 563 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 TSPAN33Q86UF1 283 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 A0A1B0GTW7 788 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 A0A1B0GVT2 93 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 A0A1W2PPK0 400 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 HPGDSO60760 199 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 PTNP21246 168 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 KCTD11Q693B1 232 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 SFRP4Q6FHJ7 346 aaPredicted RBP13.35□□□□□ -0.27
SMC5-201ENST00000361138 DHRS4L2Q6PKH6 230 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 SHFQ7M4L6 423 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 TRMT10AQ8TBZ6 339 aaKnown RBP13.35□□□□□ -0.27
SMC5-201ENST00000361138 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 SLCO4A1Q96BD0 722 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 MOAP1Q96BY2 351 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 LMLNQ96KR4 655 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 MCHR1Q99705 422 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
SMC5-201ENST00000361138 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 WASHC1A8K0Z3 465 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 FCER2P06734 321 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 GALEQ14376 348 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 LASP1Q14847 261 aaKnown RBP13.34□□□□□ -0.27
SMC5-201ENST00000361138 PYHIN1Q6K0P9 492 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 DUS3LQ96G46 650 aaKnown RBP13.34□□□□□ -0.27
SMC5-201ENST00000361138 AHCYL2Q96HN2 611 aaKnown RBP13.34□□□□□ -0.27
SMC5-201ENST00000361138 ATOH8Q96SQ7 321 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 TMEM39AQ9NV64 488 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 PLAGL1Q9UM63 463 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 TMEM5Q9Y2B1 443 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 PGAM2P15259 253 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 GABRB3P28472 473 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 GKP32189 559 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 ADRA1AP35348 466 aa13.34□□□□□ -0.27
SMC5-201ENST00000361138 MAGEA11P43364 429 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms