RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SERHLQ9NQF3 203 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 TMEFF2Q9UIK5 374 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
SQSTM1-201ENST00000360718 ASXL3Q9C0F0 2248 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 CLDN25C9JDP6 229 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 HAT1O14929 419 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 COQ9O75208 318 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ANGPTL1O95841 491 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 AVPR2P30518 371 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 CNR2P34972 360 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 CD97P48960 835 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 RPS15AP62244 130 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 PHC1P78364 1004 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC5A12Q1EHB4 618 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 OR2T5Q6IEZ7 315 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 OR2T29Q8NH02 315 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 S100ZQ8WXG8 99 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 QRFPRQ96P65 431 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC38A3Q99624 504 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SARGQ9BW04 601 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 WDR12Q9GZL7 423 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ANKMY1Q9P2S6 941 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 CSNK1G3Q9Y6M4 447 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 OR5K3A6NET4 321 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 KPNA4O00629 521 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC22A1O15245 554 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SULT1C4O75897 302 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 LRATO95237 230 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF682O95780 498 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 STATHP02808 62 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 GSNP06396 782 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SP9P0CG40 484 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 PCMT1P22061 227 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 HPCAL1P37235 193 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 LSSP48449 732 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SERPINB10P48595 397 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 PPM1FP49593 454 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 RAE1P78406 368 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SRSF11Q05519 484 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ZNF763Q0D2J5 394 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 PPP1R8Q12972 351 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ITGADQ13349 1161 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 NIPAL1Q6NVV3 410 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 PAQR7Q86WK9 346 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 C17orf82Q86X59 251 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 PARP8Q8N3A8 854 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SGCDQ92629 289 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 RSC1A1Q92681 617 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 RGMAQ96B86 450 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ZC3H10Q96K80 434 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 EGLN2Q96KS0 407 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 INPP5KQ9BT40 448 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 UCK1Q9HA47 277 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 EVA1BQ9NVM1 165 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 AP1M2Q9Y6Q5 423 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 U3KQV3 271 aa12.48□□□□□ -0.41
SQSTM1-201ENST00000360718 SCN3AQ9NY46 2000 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 PATE3B3GLJ2 98 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 J3QRK9 145 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 NDUFS4O43181 175 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 PRAMEF10O60809 474 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 PORP16435 677 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 TYRP1P17643 537 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 MAGP20916 626 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 DNAJA1P31689 397 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 RPL3P39023 403 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 BCL6P41182 706 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 KIR3DL1P43629 444 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 SPCS2Q15005 226 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 LPAL2Q16609 132 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 DUOXA1Q1HG43 343 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 TMEM35AQ53FP2 167 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 FIGLAQ6QHK4 219 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 SVOPQ8N4V2 548 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 TMCO5AQ8N6Q1 288 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 MFSD9Q8NBP5 474 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 SH3YL1Q96HL8 342 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 FCRL4Q96PJ5 515 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 F2RL3Q96RI0 385 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 KLHL25Q9H0H3 589 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 NECTIN3Q9NQS3 549 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 SLC6A13Q9NSD5 602 aa12.47□□□□□ -0.41
SQSTM1-201ENST00000360718 FUOMA2VDF0 154 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 FAM86C2PA6NEL3 165 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 M0R3G1 203 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 TNFSF14O43557 240 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 UBXN7O94888 489 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 INMTO95050 263 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 FABP3P05413 133 aa12.46□□□□□ -0.41
SQSTM1-201ENST00000360718 KLK1P06870 262 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms