RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ZNF888P0CJ79 500 aaPredicted RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 MAOAP21397 527 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 COMTP21964 271 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 SERPINB3P29508 390 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 STXBP1P61764 594 aaKnown RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 POU3F1Q03052 451 aaPredicted RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 IQCB1Q15051 598 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 EBPQ15125 230 aaKnown RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PPP1R3AQ16821 1122 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 MINDY4Q4G0A6 757 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 C17orf64Q86WR6 236 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 VWA5B2Q8N398 1253 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR5T3Q8NGG3 340 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 ACTL9Q8TC94 416 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 SHCBP1LQ9BZQ2 653 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 TRIM2Q9C040 744 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PRDM7Q9NQW5 492 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PRTFDC1Q9NRG1 225 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 MRPS33Q9Y291 106 aaKnown RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PFDN6O15212 129 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 ACOX3O15254 700 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 TJP3O95049 919 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 SERPINC1P01008 464 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 SKILP12757 684 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 MLNP12872 115 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 CYP4B1P13584 511 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 TPH1P17752 444 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 GRK3P35626 688 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 LIM2P55344 173 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 GANABQ14697 944 aaKnown RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 TMEM35AQ53FP2 167 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 MRM1Q6IN84 353 aaKnown RBP5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM47EQ6ZV65 393 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 KRT222Q8N1A0 295 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 TMEM52Q8NDY8 209 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR2L5Q8NG80 312 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 NAT14Q8WUY8 206 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PERPQ96FX8 193 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PWWP2AQ96N64 755 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 PRAP1Q96NZ9 151 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 WWTR1Q9GZV5 400 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 SAP130Q9H0E3 1048 aa5.4□□□□□ -1.55
CDC42SE2-201ENST00000360515 A0A088AWK7 358 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ATP6AP2A0A1C7CYW4 349 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF500O60304 480 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SHOX2O60902 331 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ATP6AP2O75787 350 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ALDOAP04075 364 aaKnown RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF10P21506 573 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 DNASE1L1P49184 302 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 KLHL38Q2WGJ6 581 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 PGGHGQ32M88 737 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SASS6Q6UVJ0 657 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 GALNT12Q8IXK2 581 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF615Q8N8J6 731 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 TANKQ92844 425 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZBTB9Q96C00 473 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SLC35A4Q96G79 324 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 EML4Q9HC35 981 aaKnown RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SAYSD1Q9NPB0 183 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SLC2A6Q9UGQ3 507 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 PDE10AQ9Y233 779 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 AP4B1Q9Y6B7 739 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 STAB1Q9NY15 2570 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR51F1A6NGY5 319 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SMTNL1A8MU46 457 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 RNF223E7ERA6 249 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 FFAR3O14843 346 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 GPR42O15529 346 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 DLX3O60479 287 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 CBR3O75828 277 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 MYO1DO94832 1006 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 CASP3P42574 277 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 LIMS1P48059 325 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 NAGLUP54802 743 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 RCAN2Q14206 197 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM174BQ3ZCQ3 159 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 MRNIPQ6NTE8 343 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF549Q6P9A3 640 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF771Q7L3S4 317 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 VN1R5Q7Z5H4 357 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 REXO1L1PQ8IX06 675 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 PRELID2Q8N945 189 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM83FQ8NEG4 500 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR52K1Q8NGK4 314 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 HOXB13Q92826 284 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 MCMBPQ9BTE3 642 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 CAPS2Q9BXY5 557 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 DUSP10Q9Y6W6 482 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 MAGEB16A2A368 324 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 TP53I11O14683 189 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SMAD7O15105 426 aaKnown RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 SMAD9O15198 467 aaKnown RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 GCM2O75603 506 aaPredicted RBP5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 PDE9AO76083 593 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 FTCDO95954 541 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 ATP5J2P56134 94 aa5.39□□□□□ -1.55
CDC42SE2-201ENST00000360515 EIF3EP60228 445 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms