RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PPCDCQ96CD2 204 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 CNRIP1Q96F85 164 aaPredicted RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ZNF681Q96N22 645 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ZBTB18Q99592 522 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SLC35C2Q9NQQ7 365 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 NECTIN3Q9NQS3 549 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SH3BP4Q9P0V3 963 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 UTS2RQ9UKP6 389 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 TCFL5Q9UL49 500 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PADI2Q9Y2J8 665 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PTRH2Q9Y3E5 179 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ATRXP46100 2492 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 NUP210LQ5VU65 1888 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 IDSB3KWA1 339 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 DCTN3O75935 186 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 HEXBP07686 556 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 UMODP07911 640 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 LAMP1P11279 417 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 CD1EP15812 388 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 DDX5P17844 614 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PIK3R1P27986 724 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 FRKP42685 505 aaPredicted RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 XKP51811 444 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 POLR2JP52435 117 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PCBP4P57723 403 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PHC1P78364 1004 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 KLF10Q13118 480 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 DPY19L1Q2PZI1 675 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 AGKQ53H12 422 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 MFSD4BQ5TF39 518 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ANKRD26P1Q6NSI1 321 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 BLOC1S3Q6QNY0 202 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SHISA6Q6ZSJ9 500 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SAMD14Q8IZD0 417 aaPredicted RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 NATD1Q8N6N6 113 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 EXOSC8Q96B26 276 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 KLHL29Q96CT2 875 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 CRB3Q9BUF7 120 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 CCDC106Q9BWC9 280 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ALOXE3Q9BYJ1 711 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SLC52A3Q9NQ40 469 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ATAD3AQ9NVI7 634 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 C3orf18Q9UK00 162 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 KCND3Q9UK17 655 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 BAHCC1Q9P281 2608 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 URB1O60287 2271 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 A0A1W2PS29 197 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 TCRBV16S1A1N1A0A5B0 115 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SYNDIG1LA6NDD5 238 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 MYO1GB0I1T2 1018 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 TLX3O43711 291 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SCN2BO60939 215 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 ALOX12BO75342 701 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 ERAL1O75616 437 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 IL6P05231 212 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SLC35E2P0CK97 266 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 CSNK2A2P19784 350 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 MAOAP21397 527 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 S100A3P33764 101 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 FOLR3P41439 243 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 WNT3P56703 355 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 ID2Q02363 134 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 STX4Q12846 297 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 CLN3Q13286 438 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SERTAD2Q14140 314 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 FAM174BQ3ZCQ3 159 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SPANXN4Q5MJ08 99 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 FAM69BQ5VUD6 431 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 CPZQ66K79 652 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 TMEM205Q6UW68 189 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 TSPEARQ8WU66 669 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 TSLPQ969D9 159 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 LRRC37BQ96QE4 947 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 DUSP26Q9BV47 211 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 BHLHE41Q9C0J9 482 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 SEMA3GQ9NS98 782 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 CCDC167Q9P0B6 97 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 IL17BQ9UHF5 180 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 ZNF780BQ9Y6R6 833 aa11.63□□□□□ -0.55
NIF3L1-201ENST00000359683 C9JVG2 144 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 PCDH17O14917 1159 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 IGHEP01854 428 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 PGRP06401 933 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 C8orf89P0DMQ9 161 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 CPMP14384 443 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 PORP16435 677 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 FEN1P39748 380 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 KIR3DL1P43629 444 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 DGKQP52824 942 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 RPS18P62269 152 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 DUSP2Q05923 314 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 RCAN2Q14206 197 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 SSPNQ14714 243 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 NSDHLQ15738 373 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 ZNF750Q32MQ0 723 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 PGS1Q32NB8 556 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 FAM91A1Q658Y4 838 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms