RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RUNX2Q13950 521 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SPIDRQ14159 915 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 GRM7Q14831 915 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 MLC1Q15049 377 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 RCN1Q15293 331 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 CYP51A1Q16850 503 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 C18orf63Q68DL7 685 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SPATA24Q86W54 205 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 NAXDQ8IW45 347 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SAMD14Q8IZD0 417 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 D2HGDHQ8N465 521 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 ENDOVQ8N8Q3 282 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 OR10A6Q8NH74 314 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 ZFP90Q8TF47 636 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 KLHL6Q8WZ60 621 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 RSRC1Q96IZ7 334 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SLC41A2Q96JW4 573 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 BBS4Q96RK4 519 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 NUDT22Q9BRQ3 303 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SLC35A5Q9BS91 424 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SPATA9Q9BWV2 254 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 ZNF768Q9H5H4 540 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 IKZF5Q9H5V7 419 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 KAT8Q9H7Z6 458 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 TPT1P8Q9HAU6 139 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 FANCEQ9HB96 536 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 HYKKA2RU49 373 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 FITM1A5D6W6 292 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ZNF860A6NHJ4 632 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 GLOD5A6NK44 160 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 H0Y3Z8 333 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 GSTA4O15217 222 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 PRKRAO75569 313 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 KRT75O95678 551 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 C8BP07358 591 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ANKRD34CP0C6C1 535 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 MSL3P1P0C860 447 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CD59P13987 128 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 GPX2P18283 190 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ATP6V1B2P21281 511 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 UQCRC2P22695 453 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CHI3L1P36222 383 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ERFP50548 548 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 RAB38P57729 211 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 OR4D2P58180 307 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 OLR1P78380 273 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CCL7P80098 99 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 FAM53BQ14153 422 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 FXNQ16595 210 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ZFP1Q6P2D0 407 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ERICH5Q6P6B1 374 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 GPR155Q7Z3F1 870 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 SERPINA11Q86U17 422 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 PDSS2Q86YH6 399 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 MICU2Q8IYU8 434 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CA13Q8N1Q1 262 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ARHGEF39Q8N4T4 335 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ADAMTS18Q8TE60 1221 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CRELD1Q96HD1 420 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 REXO5Q96IC2 774 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ZNF583Q96ND8 569 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 CDC6Q99741 560 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 PIF1Q9H611 641 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 SYNDIG1Q9H7V2 258 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 S100A14Q9HCY8 104 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 SLAMF7Q9NQ25 335 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 KCMF1Q9P0J7 381 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 EGFL7Q9UHF1 273 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 ZNF780BQ9Y6R6 833 aa13.06□□□□□ -0.32
PDLIM5-203ENST00000359265 RNF103-CHMP3A0A140T963 221 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 ELOVL7A1L3X0 281 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 AQP12BA6NM10 295 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 A8MU76 341 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 MYO1GB0I1T2 1018 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 TMEM150CB9EJG8 249 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 PGRMC2O15173 223 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 RDH16O75452 317 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 ERAL1O75616 437 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 OR2B3O76000 313 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 NELFEP18615 380 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 CSNK2A2P19784 350 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 GPC1P35052 558 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 AVPR1BP47901 424 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 NCBP2P52298 156 aaKnown RBP eCLIP13.05□□□□□ -0.322e-10■□□□□ 8.4
PDLIM5-203ENST00000359265 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 MRPS22P82650 360 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 HSPB3Q12988 150 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 KCNAB1Q14722 419 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 ANGPTL8Q6UXH0 198 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 CYP2R1Q6VVX0 501 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 PRSS41Q7RTY9 318 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 AQP12AQ8IXF9 295 aa13.05□□□□□ -0.32
PDLIM5-203ENST00000359265 GOLM1Q8NBJ4 401 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms