RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 CSO75390 466 aaKnown RBP16.88■□□□□ 0.29
CDK11A-204ENST00000358779 CKMT1AP12532 417 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 ADRB3P13945 408 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 SOX3P41225 446 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 XKP51811 444 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 PGBD2Q6P3X8 592 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 RBM45Q8IUH3 476 aaKnown RBP16.88■□□□□ 0.29
CDK11A-204ENST00000358779 OR4D11Q8NGI4 311 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 SMPDL3AQ92484 453 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 CEP19Q96LK0 163 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 ZNF354BQ96LW1 612 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 SDHCQ99643 169 aaPredicted RBP16.88■□□□□ 0.29
CDK11A-204ENST00000358779 AIF1LQ9BQI0 150 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 SMURF1Q9HCE7 757 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 WBP11Q9Y2W2 641 aaKnown RBP16.88■□□□□ 0.29
CDK11A-204ENST00000358779 TMEM98Q9Y2Y6 226 aa16.88■□□□□ 0.29
CDK11A-204ENST00000358779 PDZK1P1A8MUH7 402 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CTDSP2O14595 271 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 KCNJ5P48544 419 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 PCBP4P57723 403 aaKnown RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 MESP2Q0VG99 397 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 FNDC3BQ53EP0 1204 aaKnown RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 C1orf53Q5VUE5 145 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CCBE1Q6UXH8 406 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CASP12Q6UXS9 341 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 GDPD3Q7L5L3 318 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 WDR53Q7Z5U6 358 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CACTIN-AS1Q8N1I8 211 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 OR8D1Q8WZ84 308 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 EXOSC8Q96B26 276 aaKnown RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 EFHD2Q96C19 240 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 TMEM80Q96HE8 168 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CNPPD1Q9BV87 410 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CLEC2DQ9UHP7 191 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 IRAK3Q9Y616 596 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 MUC22E2RYF6 1773 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 ASNA1O43681 348 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 ERGP11308 486 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CEBPBP17676 345 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 ENDOUP21128 410 aaKnown RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 FRKP42685 505 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 LRIT3Q3SXY7 679 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 SLC34A3Q8N130 599 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 TMIEQ8NEW7 156 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 TFGQ92734 400 aaPredicted RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 SLC6A18Q96N87 628 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 TEFMQ96QE5 360 aaKnown RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 ZNF607Q96SK3 696 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 SLC30A2Q9BRI3 323 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 ASPNQ9BXN1 380 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 POLR2J3Q9H1A7 115 aaKnown RBP16.87■□□□□ 0.29
CDK11A-204ENST00000358779 WASH6PQ9NQA3 447 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 SEC14L3Q9UDX4 400 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 SNX11Q9Y5W9 270 aa16.87■□□□□ 0.29
CDK11A-204ENST00000358779 CD72P21854 359 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 ZNF91Q05481 1191 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 C9orf64Q5T6V5 341 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 TMEM53Q6P2H8 277 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 KRT73Q86Y46 540 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 SLC35B4Q969S0 331 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 LRRC3BQ96PB8 259 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 WFDC6Q9BQY6 131 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 CCDC32Q9BV29 185 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 MND1Q9BWT6 205 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 RACGAP1Q9H0H5 632 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 SERHL2Q9H4I8 314 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 DYRK4Q9NR20 520 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 ACAD8Q9UKU7 415 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 RPL36Q9Y3U8 105 aaKnown RBP16.86■□□□□ 0.29
CDK11A-204ENST00000358779 DENND4AQ7Z401 1863 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 FEZF1A0PJY2 475 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 PRRT4C9JH25 899 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 SLC28A2O43868 658 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 DDX5P17844 614 aaKnown RBP16.86■□□□□ 0.29
CDK11A-204ENST00000358779 CXCR2P25025 360 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 PSMB5P28074 263 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 CASP3P42574 277 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 REEP5Q00765 189 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 SPHARQ15513 63 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 MFSD4BQ5TF39 518 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 TRIM69Q86WT6 500 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 NUDT13Q86X67 352 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 RASSF5Q8WWW0 418 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 ZBED6CLQ96FA7 236 aaPredicted RBP16.86■□□□□ 0.29
CDK11A-204ENST00000358779 QRFPRQ96P65 431 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 FUZQ9BT04 418 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 TSSK6Q9BXA6 273 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 C3orf14Q9HBI5 128 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 LHX9Q9NQ69 397 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 POU2F3Q9UKI9 436 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 SLC27A6Q9Y2P4 619 aa16.86■□□□□ 0.29
CDK11A-204ENST00000358779 CACNB4O00305 520 aaPredicted RBP16.85■□□□□ 0.29
CDK11A-204ENST00000358779 TMPRSS11DO60235 418 aa16.85■□□□□ 0.29
CDK11A-204ENST00000358779 APOA1P02647 267 aa16.85■□□□□ 0.29
CDK11A-204ENST00000358779 HOXD12P35452 270 aa16.85■□□□□ 0.29
CDK11A-204ENST00000358779 TARDBPQ13148 414 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDK11A-204ENST00000358779 RPA4Q13156 261 aa16.85■□□□□ 0.29
CDK11A-204ENST00000358779 NCF4Q15080 339 aa16.85■□□□□ 0.29
CDK11A-204ENST00000358779 HNRNPA1L2Q32P51 320 aaKnown RBP16.85■□□□□ 0.29
CDK11A-204ENST00000358779 GRASPQ7Z6J2 395 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms