RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 ALAS2P22557 587 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 CDKN3Q16667 212 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF750Q32MQ0 723 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 FAM217AQ8IXS0 508 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ABHD11Q8NFV4 315 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 OR52E1Q8NGJ3 308 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 CHTF18Q8WVB6 975 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 RIPOR3Q96MK2 946 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ZDHHC5Q9C0B5 715 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 PTGFRNQ9P2B2 879 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 SNX7Q9UNH6 387 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 GTF2A1LQ9UNN4 478 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 GPR34Q9UPC5 381 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 MAN2B2Q9Y2E5 1009 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 RP1L1Q8IWN7 2480 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 B3GALT2O43825 422 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 DDCP20711 480 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 NTSR1P30989 418 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 ITGA1P56199 1179 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 FCHO2Q0JRZ9 810 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF155Q12901 538 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 SLC13A2Q13183 592 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 GINS1Q14691 196 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 SPCS2Q15005 226 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 NNATQ16517 81 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 C10orf62Q5T681 223 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF438Q7Z4V0 828 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF554Q86TJ5 538 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 AMIGO1Q86WK6 493 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 PEX5LQ8IYB4 626 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 WDR20Q8TBZ3 569 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 TUBA1CQ9BQE3 449 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 NMNAT1Q9HAN9 279 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 MRPS7Q9Y2R9 242 aaKnown RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 PRAMEF33A0A0G2JMD5 474 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 AREL1O15033 823 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 RPL4P36578 427 aaKnown RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 OPRL1P41146 370 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 SLC35F1Q5T1Q4 408 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 C8orf82Q6P1X6 216 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 MRGPRX3Q96LB0 322 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 PAK1IP1Q9NWT1 392 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 MALT1Q9UDY8 824 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 KNTC1P50748 2209 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 PRAMEF10O60809 474 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 HMGN2P05204 90 aaKnown RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 IMPDH2P12268 514 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 CENPSQ8N2Z9 138 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 METTL4Q8N3J2 472 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 RBM18Q96H35 190 aaKnown RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 AHCYL2Q96HN2 611 aaKnown RBP13.54□□□□□ -0.24
SIRPA-202ENST00000358771 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 HRASLS2Q9NWW9 162 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 GPR52Q9Y2T5 361 aa13.54□□□□□ -0.24
SIRPA-202ENST00000358771 OR6C74A6NCV1 312 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 H3BQ06 376 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 CASKO14936 926 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 PBX2P40425 430 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 CRISP1P54107 249 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 DUSP7Q16829 419 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 LCTLQ6UWM7 567 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 TMEFF1Q8IYR6 380 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 NIPSNAP1Q9BPW8 284 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 TAS2R16Q9NYV7 291 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 CLEC4AQ9UMR7 237 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 GSTK1Q9Y2Q3 226 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 TSC22D4Q9Y3Q8 395 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 WDR45Q9Y484 360 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 CCL27Q9Y4X3 112 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 NYNRINQ9P2P1 1898 aaKnown RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 IGLV3-16A0A075B6K0 115 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 PLPP1O14494 284 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 MFN2O95140 757 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 RHCEP18577 417 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 CSNK2BP67870 215 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 MVKQ03426 396 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 DEFB110Q30KQ9 67 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 RSBN1Q5VWQ0 802 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 HSDL2Q6YN16 418 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 METTL27Q8N6F8 245 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 PAPD5Q8NDF8 572 aaKnown RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 NUP43Q8NFH3 380 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 PIGXQ8TBF5 258 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 UBASH3BQ8TF42 649 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 MYNNQ9NPC7 610 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 RBMX2Q9Y388 322 aaKnown RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 ALPK2Q86TB3 2170 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 OTOL1A6NHN0 477 aaPredicted RBP13.53□□□□□ -0.24
SIRPA-202ENST00000358771 MC3RP41968 323 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 MICAQ29983 383 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 PROX2Q3B8N5 592 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 C9orf50Q5SZB4 431 aa13.53□□□□□ -0.24
SIRPA-202ENST00000358771 SHFQ7M4L6 423 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms