RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 UGT2B17O75795 530 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 OXSR1O95747 527 aaPredicted RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 TIMP1P01033 207 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 SELENBP1Q13228 472 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 ELAVL3Q14576 367 aaKnown RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 HNRNPA1L2Q32P51 320 aaKnown RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 C9orf64Q5T6V5 341 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 C1orf53Q5VUE5 145 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 SLX4IPQ5VYV7 408 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 C19orf48Q6RUI8 117 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 NUDT13Q86X67 352 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 CELF5Q8N6W0 485 aaKnown RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 PLA2G15Q8NCC3 412 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 OR4D11Q8NGI4 311 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 KLHL6Q8WZ60 621 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 ZBED6CLQ96FA7 236 aaPredicted RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 TXNDC15Q96J42 360 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 ZNF354BQ96LW1 612 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 TRNT1Q96Q11 434 aaKnown RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 RHBGQ9H310 441 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 TEX10Q9NXF1 929 aaPredicted RBP8.15□□□□□ -1.1
RFX3-202ENST00000358730 CLEC2DQ9UHP7 191 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 MYO10Q9HD67 2058 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 A0A0G2JN53 185 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 EDDM13A0A1B0GTR0 161 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 PDZK1P1A8MUH7 402 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 H7BY64 318 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 NDUFS4O43181 175 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 TMPRSS11DO60235 418 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 CSO75390 466 aaKnown RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 PCCBP05166 539 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 SCG5P05408 212 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 RB1P06400 928 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 CXCR2P25025 360 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 CSTF2P33240 577 aaKnown RBP eCLIP8.15□□□□□ -1.11
RFX3-202ENST00000358730 CTNNB1P35222 781 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 CCR8P51685 355 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 DEFA1P59665 94 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 DEFA3P59666 94 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 SNRPGP62308 76 aaKnown RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 ZNF91Q05481 1191 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.15□□□□□ -1.11
RFX3-202ENST00000358730 TARDBPQ13148 414 aaKnown RBP eCLIP8.15□□□□□ -1.11
RFX3-202ENST00000358730 ILKQ13418 452 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 ATAD3BQ5T9A4 648 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 PGBD2Q6P3X8 592 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 ERN2Q76MJ5 926 aaKnown RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 TMIEQ8NEW7 156 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 CXorf40AQ8TE69 158 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 TRIM43Q96BQ3 446 aaPredicted RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 ZFYVE19Q96K21 471 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 PRAP1Q96NZ9 151 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 TEFMQ96QE5 360 aaKnown RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 ZNF607Q96SK3 696 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 TREX2Q9BQ50 279 aaPredicted RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 WFDC6Q9BQY6 131 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 CNPPD1Q9BV87 410 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 POLR2J3Q9H1A7 115 aaKnown RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 PELI2Q9HAT8 420 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 SLC25A19Q9HC21 320 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 HHATLQ9HCP6 504 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 TM7SF3Q9NS93 570 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 EHD3Q9NZN3 535 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 P2RX2Q9UBL9 471 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 SLC23A2Q9UGH3 650 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 MKLN1Q9UL63 735 aa8.15□□□□□ -1.11
RFX3-202ENST00000358730 MRPS23Q9Y3D9 190 aaKnown RBP8.15□□□□□ -1.11
RFX3-202ENST00000358730 LOC110117498-PIK3R3F6TDL0 507 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 CTDSP2O14595 271 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 KMOO15229 486 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 RGS5O15539 181 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 HOXC11O43248 304 aaPredicted RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 RPN2P04844 631 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 SERPIND1P05546 499 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 DDX5P17844 614 aaKnown RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 KCNJ5P48544 419 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 CCT3P49368 545 aaKnown RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 PCBP4P57723 403 aaKnown RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 REEP5Q00765 189 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 RHAGQ02094 409 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 KRR1Q13601 381 aaKnown RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 SPHARQ15513 63 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 SYPL1Q16563 259 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 MEDAGQ5VYS4 303 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 WDR53Q7Z5U6 358 aaPredicted RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 BCDIN3DQ7Z5W3 292 aaKnown RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 ADCK2Q7Z695 626 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 CCDC190Q86UF4 302 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 CACUL1Q86Y37 369 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 MMAAQ8IVH4 418 aaKnown RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 SFTPA1Q8IWL2 248 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 IQCF1Q8N6M8 205 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 NATD1Q8N6N6 113 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 TCEANCQ8N8B7 351 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 OR5D16Q8NGK9 328 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 OR5K2Q8NHB8 316 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 SLC7A13Q8TCU3 470 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 POF1BQ8WVV4 589 aa8.14□□□□□ -1.11
RFX3-202ENST00000358730 OTUB1Q96FW1 271 aaPredicted RBP8.14□□□□□ -1.11
RFX3-202ENST00000358730 TMEM80Q96HE8 168 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms