RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 CIDECQ96AQ7 238 aaPredicted RBP17.98■□□□□ 0.47
PRPF39-201ENST00000355765 KCNJ15Q99712 375 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 DSPPQ9NZW4 1301 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 SHISA3A0PJX4 238 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 MGAT4DA6NG13 374 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 H3BNC9 293 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 IFNW1P05000 195 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 GKP32189 559 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 CCR7P32248 378 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 OPRD1P41143 372 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 CLCNKAP51800 687 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 ARF5P84085 180 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 XKR6Q5GH73 641 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 NCEH1Q6PIU2 408 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 VRK3Q8IV63 474 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 DNAJC11Q9NVH1 559 aa17.98■□□□□ 0.47
PRPF39-201ENST00000355765 SLC9A3R1O14745 358 aaPredicted RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 SERPINI2O75830 405 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 MPC2O95563 127 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 RAB36O95755 333 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 CFDP00746 253 aaPredicted RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 RAE1P78406 368 aaKnown RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 RPS26P11Q5JNZ5 115 aaPredicted RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 FAM180BQ6P0A1 224 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 USP45Q70EL2 814 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 CREB3L1Q96BA8 519 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 FCRL1Q96LA6 429 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 P2RY13Q9BPV8 354 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 TMED9Q9BVK6 235 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 TBC1D17Q9HA65 648 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 ZFYVE1Q9HBF4 777 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 ZNF282Q9UDV7 671 aaPredicted RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 MBD1Q9UIS9 605 aaPredicted RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 CHD5Q8TDI0 1954 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 M0QZ92 97 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 B4GALT3O60512 393 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 HIST1H2AGP0C0S8 130 aaPredicted RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 JUPP14923 745 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 RHCEP18577 417 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 HIST1H2ADP20671 130 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 BDKRB1P46663 353 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 MRPS6P82932 125 aaKnown RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 TMEM201Q5SNT2 666 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 GPR139Q6DWJ6 353 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 METTL2BQ6P1Q9 378 aaKnown RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 QSOX2Q6ZRP7 698 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 CHMP1BQ7LBR1 199 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 NPLOC4Q8TAT6 608 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 HIST1H2AHQ96KK5 128 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 HIST1H2AJQ99878 128 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 H2AFJQ9BTM1 129 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 HTATIP2Q9BUP3 242 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 ZC4H2Q9NQZ6 224 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 SLCO1C1Q9NYB5 712 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 GSTK1Q9Y2Q3 226 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 SF3B6Q9Y3B4 125 aaKnown RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 CD160O95971 181 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 SOAT1P35610 550 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 TUSC3Q13454 348 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 KLHL12Q53G59 568 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 GARNL3Q5VVW2 1013 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 ARSKQ6UWY0 536 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 ADGRD2Q7Z7M1 963 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 OR8J1Q8NGP2 316 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 POF1BQ8WVV4 589 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 POLR2J3Q9H1A7 115 aaKnown RBP17.97■□□□□ 0.47
PRPF39-201ENST00000355765 NUDT15Q9NV35 164 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
PRPF39-201ENST00000355765 LOC105369274A0A096LPK9 316 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 GLYATL1P3A0A0U1RQE8 302 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 ACSL4O60488 711 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 CHI3L1P36222 383 aaPredicted RBP17.96■□□□□ 0.47
PRPF39-201ENST00000355765 SLC6A12P48065 614 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 MAP2K6P52564 334 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 SMSP52788 366 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 WNT4P56705 351 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 MC1RQ01726 317 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 GRK1Q15835 563 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 C12orf73Q69YU5 71 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 LIPIQ6XZB0 460 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 OR4N4Q8N0Y3 316 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 LRR1Q96L50 414 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 MED18Q9BUE0 208 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 ERVMER34-1Q9H9K5 563 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 LIN7BQ9HAP6 207 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 FOLH1BQ9HBA9 442 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 KCTD5Q9NXV2 234 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 C2orf92A0A1B0GVN3 265 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 E7EQ34 232 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 NUPL2O15504 423 aaKnown RBP17.96■□□□□ 0.47
PRPF39-201ENST00000355765 HOXD4P09016 255 aaPredicted RBP17.96■□□□□ 0.47
PRPF39-201ENST00000355765 STOMP27105 288 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 IRS1P35568 1242 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 RHOAP61586 193 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 ILKQ13418 452 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 SLC5A12Q1EHB4 618 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 ANXA8L1Q5VT79 327 aa17.96■□□□□ 0.47
PRPF39-201ENST00000355765 TMEM81Q6P7N7 255 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms