RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CSTAP01040 98 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 IFNA10P01566 189 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 HOXB2P14652 356 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 MSX1P28360 303 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 AGTR2P50052 363 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 OLIG2Q13516 323 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 TMPPEQ6ZT21 453 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 NUP43Q8NFH3 380 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 OR5T1Q8NG75 326 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 TSPEARQ8WU66 669 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 HOXB13Q92826 284 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 MMABQ96EY8 250 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 UBE2J1Q9Y385 318 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 FAM221BA6H8Z2 402 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 VEGFDO43915 354 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 OR2B3O76000 313 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 TYRP14679 529 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 PRKCAP17252 672 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 ENDOUP21128 410 aaKnown RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 CHMP24386 653 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 AK4P27144 223 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 CCDC116Q8IYX3 515 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 PLEKHA3Q9HB20 300 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 A0A0G2JLL6 359 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 APOC3P02656 99 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 SOX9P48436 509 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 MALLQ13021 153 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 PPA1Q15181 289 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 TMEM205Q6UW68 189 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 PRRT2Q7Z6L0 340 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 MEAF6Q9HAF1 191 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 CLDND1Q9NY35 253 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 KCNAB2Q13303 367 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 LRIT3Q3SXY7 679 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 ELMOD2Q8IZ81 293 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 DCAF4L2Q8NA75 395 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 SAV1Q9H4B6 383 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 ACSL5Q9ULC5 683 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 SLC16A5O15375 505 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 EMC8O43402 210 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 KIAA0513O60268 411 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 ATG12O94817 140 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 FASLGP48023 281 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 VSX2P58304 361 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 WDR45BQ5MNZ6 344 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 ENDOVQ8N8Q3 282 aaKnown RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 BORCS7Q96B45 105 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 BCO2Q9BYV7 579 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 PPP4R1LQ9P1A2 415 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 PCDHB3Q9Y5E6 796 aa14.28□□□□□ -0.12
LMX1B-201ENST00000355497 TRBV2A0A0J9YWF9 115 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 TOXO94900 526 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 CFHP08603 1231 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 UCHL1P09936 223 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 AKR1C4P17516 323 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 RIDAP52758 137 aaKnown RBP14.27□□□□□ -0.12
LMX1B-201ENST00000355497 TMEM115Q12893 351 aaPredicted RBP14.27□□□□□ -0.12
LMX1B-201ENST00000355497 ASPGQ86U10 573 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 CMTM8Q8IZV2 173 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 DTX3Q8N9I9 347 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 HS6ST2Q96MM7 605 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 CNN2Q99439 309 aaKnown RBP14.27□□□□□ -0.12
LMX1B-201ENST00000355497 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 WNT6Q9Y6F9 365 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 SCO2O43819 266 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 GALTP07902 379 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 CDK2P24941 298 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 CD34P28906 385 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 DLSTP36957 453 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 PIGFQ07326 219 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 PDZD9Q8IXQ8 264 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 TRAM1L1Q8N609 369 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 WDR20Q8TBZ3 569 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 RBCK1Q9BYM8 510 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 OARD1Q9Y530 152 aa14.27□□□□□ -0.12
LMX1B-201ENST00000355497 ARPC4-TTLL3A0A0A6YYG9 625 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 EEF1E1-BLOC1S5C9J1V9 151 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 H7BY64 318 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 PPP1R3AQ16821 1122 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 C6orf141Q5SZD1 244 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 BORAQ6PGQ7 559 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 SETD7Q8WTS6 366 aaKnown RBP14.27□□□□□ -0.13
LMX1B-201ENST00000355497 ZFAND2BQ8WV99 257 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 MR1Q95460 341 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 PRAP1Q96NZ9 151 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 DNTTIP1Q9H147 329 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 SOCS2O14508 198 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 PHYHO14832 338 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 LRRTM2O43300 516 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 CNOT4O95628 575 aaKnown RBP14.27□□□□□ -0.13
LMX1B-201ENST00000355497 OXSR1O95747 527 aaPredicted RBP14.27□□□□□ -0.13
LMX1B-201ENST00000355497 C7P10643 843 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 FECHP22830 423 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 RNF144AP50876 292 aaPredicted RBP14.27□□□□□ -0.13
LMX1B-201ENST00000355497 POLR2HP52434 150 aaKnown RBP14.27□□□□□ -0.13
LMX1B-201ENST00000355497 PRKCZQ05513 592 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 TEAD2Q15562 447 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 TMEM151AQ8N4L1 468 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 MARVELD2Q8N4S9 558 aa14.27□□□□□ -0.13
LMX1B-201ENST00000355497 KIAA1143Q96AT1 154 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms